Gene : Bradi4g37180 B. distachyon v3.1
Defline:  (1 of 1) PTHR12899//PTHR12899:SF4 - 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL Genomic Order:  4797
Name:  ? Bradi4g37180 Secondary Identifier:  ? PAC:32783553
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g37180 0.5kb upstream 0.5kb upstream 1245 true Bd4: 42284881-42286125 Brachypodium distachyon
Bradi4g37180 0.5kb upstream 0.5kb upstream 500 false Bd4: 42285626-42286125 Brachypodium distachyon
Bradi4g37180 0.5kb downstream 0.5kb downstream 1245 true Bd4: 42284381-42285625 Brachypodium distachyon
Bradi4g37180 0.5kb downstream 0.5kb downstream 500 false Bd4: 42284381-42284880 Brachypodium distachyon
Bradi4g37180 1.0kb upstream 1.0kb upstream 1745 true Bd4: 42284881-42286625 Brachypodium distachyon
Bradi4g37180 1.0kb upstream 1.0kb upstream 1000 false Bd4: 42285626-42286625 Brachypodium distachyon
Bradi4g37180 1.0kb downstream 1.0kb downstream 1745 true Bd4: 42283881-42285625 Brachypodium distachyon
Bradi4g37180 1.0kb downstream 1.0kb downstream 1000 false Bd4: 42283881-42284880 Brachypodium distachyon
Bradi4g37180 2.0kb upstream 2.0kb upstream 2745 true Bd4: 42284881-42287625 Brachypodium distachyon
Bradi4g37180 2.0kb upstream 2.0kb upstream 2000 false Bd4: 42285626-42287625 Brachypodium distachyon
Bradi4g37180 2.0kb downstream 2.0kb downstream 2745 true Bd4: 42282881-42285625 Brachypodium distachyon
Bradi4g37180 2.0kb downstream 2.0kb downstream 2000 false Bd4: 42282881-42284880 Brachypodium distachyon
Bradi4g37180 5.0kb upstream 5.0kb upstream 5745 true Bd4: 42284881-42290625 Brachypodium distachyon
Bradi4g37180 5.0kb upstream 5.0kb upstream 5000 false Bd4: 42285626-42290625 Brachypodium distachyon
Bradi4g37180 5.0kb downstream 5.0kb downstream 5745 true Bd4: 42279881-42285625 Brachypodium distachyon
Bradi4g37180 5.0kb downstream 5.0kb downstream 5000 false Bd4: 42279881-42284880 Brachypodium distachyon
Bradi4g37180 10.0kb upstream 10.0kb upstream 10745 true Bd4: 42284881-42295625 Brachypodium distachyon
Bradi4g37180 10.0kb upstream 10.0kb upstream 10000 false Bd4: 42285626-42295625 Brachypodium distachyon
Bradi4g37180 10.0kb downstream 10.0kb downstream 10745 true Bd4: 42274881-42285625 Brachypodium distachyon
Bradi4g37180 10.0kb downstream 10.0kb downstream 10000 false Bd4: 42274881-42284880 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124582036 5269 Grass View MSA
122047564 5273 Angiosperm View MSA
121310762 5274 Embryophyte View MSA
123348169 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.597        
cufflinks 4.297        
cufflinks 4.602        
cufflinks 2.324        
cufflinks 1.152       Low
cufflinks 4.834        
cufflinks 5.282       High
cufflinks 2.455        
cufflinks 4.19        
cufflinks 2.544        
cufflinks 5.655       High
cufflinks 2.218        
cufflinks 4.864        
cufflinks 4.048        
cufflinks 1.164       Low
cufflinks 6.003       High
cufflinks 4.05        
cufflinks 2.242        
cufflinks 4.095        
cufflinks 2.146        
cufflinks 2.638        
cufflinks 2.915        
cufflinks 1.868        
cufflinks 3.391        
cufflinks 4.187        
cufflinks 3.992        
cufflinks 5.051        
cufflinks 5.168       High
cufflinks 4.59        
cufflinks 2.464        

0 Strain