Gene : Bradi4g37380 B. distachyon v3.1
Defline:  (1 of 1) 2.4.2.19 - Nicotinate-nucleotide diphosphorylase (carboxylating) / Quinolinate phosphoribosyltransferase (decarboxylating) Genomic Order:  4823
Name:  ? Bradi4g37380 Secondary Identifier:  ? PAC:32791668
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-5653 Brachypodium distachyon pathologic  
Bdistachyon PYRIDNUCSYN-PWY Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g37380 0.5kb upstream 0.5kb upstream 4536 true Bd4: 42458380-42462915 Brachypodium distachyon
Bradi4g37380 0.5kb upstream 0.5kb upstream 500 false Bd4: 42458380-42458879 Brachypodium distachyon
Bradi4g37380 0.5kb downstream 0.5kb downstream 4536 true Bd4: 42458880-42463415 Brachypodium distachyon
Bradi4g37380 0.5kb downstream 0.5kb downstream 500 false Bd4: 42462916-42463415 Brachypodium distachyon
Bradi4g37380 1.0kb upstream 1.0kb upstream 5036 true Bd4: 42457880-42462915 Brachypodium distachyon
Bradi4g37380 1.0kb upstream 1.0kb upstream 1000 false Bd4: 42457880-42458879 Brachypodium distachyon
Bradi4g37380 1.0kb downstream 1.0kb downstream 5036 true Bd4: 42458880-42463915 Brachypodium distachyon
Bradi4g37380 1.0kb downstream 1.0kb downstream 1000 false Bd4: 42462916-42463915 Brachypodium distachyon
Bradi4g37380 2.0kb upstream 2.0kb upstream 6036 true Bd4: 42456880-42462915 Brachypodium distachyon
Bradi4g37380 2.0kb upstream 2.0kb upstream 2000 false Bd4: 42456880-42458879 Brachypodium distachyon
Bradi4g37380 2.0kb downstream 2.0kb downstream 6036 true Bd4: 42458880-42464915 Brachypodium distachyon
Bradi4g37380 2.0kb downstream 2.0kb downstream 2000 false Bd4: 42462916-42464915 Brachypodium distachyon
Bradi4g37380 5.0kb upstream 5.0kb upstream 9036 true Bd4: 42453880-42462915 Brachypodium distachyon
Bradi4g37380 5.0kb upstream 5.0kb upstream 5000 false Bd4: 42453880-42458879 Brachypodium distachyon
Bradi4g37380 5.0kb downstream 5.0kb downstream 9036 true Bd4: 42458880-42467915 Brachypodium distachyon
Bradi4g37380 5.0kb downstream 5.0kb downstream 5000 false Bd4: 42462916-42467915 Brachypodium distachyon
Bradi4g37380 10.0kb upstream 10.0kb upstream 14036 true Bd4: 42448880-42462915 Brachypodium distachyon
Bradi4g37380 10.0kb upstream 10.0kb upstream 10000 false Bd4: 42448880-42458879 Brachypodium distachyon
Bradi4g37380 10.0kb downstream 10.0kb downstream 14036 true Bd4: 42458880-42472915 Brachypodium distachyon
Bradi4g37380 10.0kb downstream 10.0kb downstream 10000 false Bd4: 42462916-42472915 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026837 5273 Angiosperm View MSA
124575538 5269 Grass View MSA
121346230 5274 Embryophyte View MSA
123424244 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.032        
cufflinks 2.661        
cufflinks 2.358        
cufflinks 2.494        
cufflinks 1.712        
cufflinks 2.006        
cufflinks 2.3        
cufflinks 2.034        
cufflinks 2.292        
cufflinks 1.619       Low
cufflinks 3.254       High
cufflinks 2.228        
cufflinks 2.572        
cufflinks 3.228       High
cufflinks 2.62        
cufflinks 2.289        
cufflinks 1.767        
cufflinks 2.296        
cufflinks 1.574       Low
cufflinks 1.4       Low
cufflinks 2.499        
cufflinks 1.857        
cufflinks 1.997        
cufflinks 2.298        
cufflinks 2.102        
cufflinks 2.086        
cufflinks 3.449       High
cufflinks 2.004        
cufflinks 1.696        
cufflinks 2.173        

0 Strain