Gene : Bradi3g27288 B. distachyon v3.1
Defline:  (1 of 2) PTHR34971:SF2 - PHOTOSYSTEM II REACTION CENTER PROTEIN Z Genomic Order:  3223
Name:  ? Bradi3g27288 Secondary Identifier:  ? PAC:32813435
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g27288 0.5kb upstream 0.5kb upstream 689 true Bd3: 28019603-28020291 Brachypodium distachyon
Bradi3g27288 0.5kb upstream 0.5kb upstream 500 false Bd3: 28019792-28020291 Brachypodium distachyon
Bradi3g27288 0.5kb downstream 0.5kb downstream 689 true Bd3: 28019103-28019791 Brachypodium distachyon
Bradi3g27288 0.5kb downstream 0.5kb downstream 500 false Bd3: 28019103-28019602 Brachypodium distachyon
Bradi3g27288 1.0kb upstream 1.0kb upstream 1189 true Bd3: 28019603-28020791 Brachypodium distachyon
Bradi3g27288 1.0kb upstream 1.0kb upstream 1000 false Bd3: 28019792-28020791 Brachypodium distachyon
Bradi3g27288 1.0kb downstream 1.0kb downstream 1189 true Bd3: 28018603-28019791 Brachypodium distachyon
Bradi3g27288 1.0kb downstream 1.0kb downstream 1000 false Bd3: 28018603-28019602 Brachypodium distachyon
Bradi3g27288 2.0kb upstream 2.0kb upstream 2189 true Bd3: 28019603-28021791 Brachypodium distachyon
Bradi3g27288 2.0kb upstream 2.0kb upstream 2000 false Bd3: 28019792-28021791 Brachypodium distachyon
Bradi3g27288 2.0kb downstream 2.0kb downstream 2189 true Bd3: 28017603-28019791 Brachypodium distachyon
Bradi3g27288 2.0kb downstream 2.0kb downstream 2000 false Bd3: 28017603-28019602 Brachypodium distachyon
Bradi3g27288 5.0kb upstream 5.0kb upstream 5189 true Bd3: 28019603-28024791 Brachypodium distachyon
Bradi3g27288 5.0kb upstream 5.0kb upstream 5000 false Bd3: 28019792-28024791 Brachypodium distachyon
Bradi3g27288 5.0kb downstream 5.0kb downstream 5189 true Bd3: 28014603-28019791 Brachypodium distachyon
Bradi3g27288 5.0kb downstream 5.0kb downstream 5000 false Bd3: 28014603-28019602 Brachypodium distachyon
Bradi3g27288 10.0kb upstream 10.0kb upstream 10189 true Bd3: 28019603-28029791 Brachypodium distachyon
Bradi3g27288 10.0kb upstream 10.0kb upstream 10000 false Bd3: 28019792-28029791 Brachypodium distachyon
Bradi3g27288 10.0kb downstream 10.0kb downstream 10189 true Bd3: 28009603-28019791 Brachypodium distachyon
Bradi3g27288 10.0kb downstream 10.0kb downstream 10000 false Bd3: 28009603-28019602 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028507 5273 Angiosperm View MSA
124546628 5269 Grass View MSA
121349923 5274 Embryophyte View MSA
123381503 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain