Gene : Bradi4g37090 B. distachyon v3.1
Defline:  (1 of 1) PTHR33734:SF5 - LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 Genomic Order:  4788
Name:  ? Bradi4g37090 Secondary Identifier:  ? PAC:32790387
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g37090 0.5kb upstream 0.5kb upstream 3538 true Bd4: 42224157-42227694 Brachypodium distachyon
Bradi4g37090 0.5kb upstream 0.5kb upstream 500 false Bd4: 42224157-42224656 Brachypodium distachyon
Bradi4g37090 0.5kb downstream 0.5kb downstream 3538 true Bd4: 42224657-42228194 Brachypodium distachyon
Bradi4g37090 0.5kb downstream 0.5kb downstream 500 false Bd4: 42227695-42228194 Brachypodium distachyon
Bradi4g37090 1.0kb upstream 1.0kb upstream 4038 true Bd4: 42223657-42227694 Brachypodium distachyon
Bradi4g37090 1.0kb upstream 1.0kb upstream 1000 false Bd4: 42223657-42224656 Brachypodium distachyon
Bradi4g37090 1.0kb downstream 1.0kb downstream 4038 true Bd4: 42224657-42228694 Brachypodium distachyon
Bradi4g37090 1.0kb downstream 1.0kb downstream 1000 false Bd4: 42227695-42228694 Brachypodium distachyon
Bradi4g37090 2.0kb upstream 2.0kb upstream 5038 true Bd4: 42222657-42227694 Brachypodium distachyon
Bradi4g37090 2.0kb upstream 2.0kb upstream 2000 false Bd4: 42222657-42224656 Brachypodium distachyon
Bradi4g37090 2.0kb downstream 2.0kb downstream 5038 true Bd4: 42224657-42229694 Brachypodium distachyon
Bradi4g37090 2.0kb downstream 2.0kb downstream 2000 false Bd4: 42227695-42229694 Brachypodium distachyon
Bradi4g37090 5.0kb upstream 5.0kb upstream 8038 true Bd4: 42219657-42227694 Brachypodium distachyon
Bradi4g37090 5.0kb upstream 5.0kb upstream 5000 false Bd4: 42219657-42224656 Brachypodium distachyon
Bradi4g37090 5.0kb downstream 5.0kb downstream 8038 true Bd4: 42224657-42232694 Brachypodium distachyon
Bradi4g37090 5.0kb downstream 5.0kb downstream 5000 false Bd4: 42227695-42232694 Brachypodium distachyon
Bradi4g37090 10.0kb upstream 10.0kb upstream 13038 true Bd4: 42214657-42227694 Brachypodium distachyon
Bradi4g37090 10.0kb upstream 10.0kb upstream 10000 false Bd4: 42214657-42224656 Brachypodium distachyon
Bradi4g37090 10.0kb downstream 10.0kb downstream 13038 true Bd4: 42224657-42237694 Brachypodium distachyon
Bradi4g37090 10.0kb downstream 10.0kb downstream 10000 false Bd4: 42227695-42237694 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041196 5273 Angiosperm View MSA
124571342 5269 Grass View MSA
121350262 5274 Embryophyte View MSA
123381651 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.823        
cufflinks 3.51        
cufflinks 3.156        
cufflinks 3.09        
cufflinks 1.01        
cufflinks 3.696        
cufflinks 4.151        
cufflinks 3.656        
cufflinks 3.441        
cufflinks 2.256        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.129        
cufflinks 0.005     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.478        
cufflinks 4.338        
cufflinks 7.013        
cufflinks 5.247        
cufflinks 4.475        
cufflinks 0.135     Low Low
cufflinks 2.687        
cufflinks 2.601        
cufflinks 2.829        
cufflinks 1.972        
cufflinks 3.075        
cufflinks 2.248        
cufflinks 0.008     Low Low
cufflinks 2.4        
cufflinks 2.863        
cufflinks 3.986        

0 Strain