Gene : Bradi3g27852 B. distachyon v3.1
Defline:  (1 of 1) PTHR12136:SF47 - STEROIDOGENIC ACUTE REGULATORY-LIKE PROTEIN 1 Genomic Order:  3318
Name:  ? Bradi3g27852 Secondary Identifier:  ? PAC:32821128
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g27852 0.5kb upstream 0.5kb upstream 10472 true Bd3: 28748191-28758662 Brachypodium distachyon
Bradi3g27852 0.5kb upstream 0.5kb upstream 500 false Bd3: 28748191-28748690 Brachypodium distachyon
Bradi3g27852 0.5kb downstream 0.5kb downstream 10472 true Bd3: 28748691-28759162 Brachypodium distachyon
Bradi3g27852 0.5kb downstream 0.5kb downstream 500 false Bd3: 28758663-28759162 Brachypodium distachyon
Bradi3g27852 1.0kb upstream 1.0kb upstream 10972 true Bd3: 28747691-28758662 Brachypodium distachyon
Bradi3g27852 1.0kb upstream 1.0kb upstream 1000 false Bd3: 28747691-28748690 Brachypodium distachyon
Bradi3g27852 1.0kb downstream 1.0kb downstream 10972 true Bd3: 28748691-28759662 Brachypodium distachyon
Bradi3g27852 1.0kb downstream 1.0kb downstream 1000 false Bd3: 28758663-28759662 Brachypodium distachyon
Bradi3g27852 2.0kb upstream 2.0kb upstream 11972 true Bd3: 28746691-28758662 Brachypodium distachyon
Bradi3g27852 2.0kb upstream 2.0kb upstream 2000 false Bd3: 28746691-28748690 Brachypodium distachyon
Bradi3g27852 2.0kb downstream 2.0kb downstream 11972 true Bd3: 28748691-28760662 Brachypodium distachyon
Bradi3g27852 2.0kb downstream 2.0kb downstream 2000 false Bd3: 28758663-28760662 Brachypodium distachyon
Bradi3g27852 5.0kb upstream 5.0kb upstream 14972 true Bd3: 28743691-28758662 Brachypodium distachyon
Bradi3g27852 5.0kb upstream 5.0kb upstream 5000 false Bd3: 28743691-28748690 Brachypodium distachyon
Bradi3g27852 5.0kb downstream 5.0kb downstream 14972 true Bd3: 28748691-28763662 Brachypodium distachyon
Bradi3g27852 5.0kb downstream 5.0kb downstream 5000 false Bd3: 28758663-28763662 Brachypodium distachyon
Bradi3g27852 10.0kb upstream 10.0kb upstream 19972 true Bd3: 28738691-28758662 Brachypodium distachyon
Bradi3g27852 10.0kb upstream 10.0kb upstream 10000 false Bd3: 28738691-28748690 Brachypodium distachyon
Bradi3g27852 10.0kb downstream 10.0kb downstream 19972 true Bd3: 28748691-28768662 Brachypodium distachyon
Bradi3g27852 10.0kb downstream 10.0kb downstream 10000 false Bd3: 28758663-28768662 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124589262 5269 Grass View MSA
122042649 5273 Angiosperm View MSA
121346561 5274 Embryophyte View MSA
123428121 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.34        
cufflinks 3.644        
cufflinks 3.36        
cufflinks 2.929        
cufflinks 2.032        
cufflinks 3.13        
cufflinks 2.891        
cufflinks 3.037        
cufflinks 3.646        
cufflinks 1.75       Low
cufflinks 2.899        
cufflinks 2.921        
cufflinks 2.403        
cufflinks 2.306        
cufflinks 2.101        
cufflinks 3.316        
cufflinks 1.875       Low
cufflinks 5.67       High
cufflinks 3.164        
cufflinks 3.726        
cufflinks 2.955        
cufflinks 3.177        
cufflinks 3.172        
cufflinks 3.242        
cufflinks 2.765        
cufflinks 3.075        
cufflinks 2.977        
cufflinks 2.82        
cufflinks 2.647        
cufflinks 3.636        

0 Strain