Gene : Bradi3g27870 B. distachyon v3.1
Genomic Order:  3322 Name:  ? Bradi3g27870
Secondary Identifier:  ? PAC:32818810
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g27870 0.5kb upstream 0.5kb upstream 2399 true Bd3: 28795554-28797952 Brachypodium distachyon
Bradi3g27870 0.5kb upstream 0.5kb upstream 500 false Bd3: 28795554-28796053 Brachypodium distachyon
Bradi3g27870 0.5kb downstream 0.5kb downstream 2399 true Bd3: 28796054-28798452 Brachypodium distachyon
Bradi3g27870 0.5kb downstream 0.5kb downstream 500 false Bd3: 28797953-28798452 Brachypodium distachyon
Bradi3g27870 1.0kb upstream 1.0kb upstream 2899 true Bd3: 28795054-28797952 Brachypodium distachyon
Bradi3g27870 1.0kb upstream 1.0kb upstream 1000 false Bd3: 28795054-28796053 Brachypodium distachyon
Bradi3g27870 1.0kb downstream 1.0kb downstream 2899 true Bd3: 28796054-28798952 Brachypodium distachyon
Bradi3g27870 1.0kb downstream 1.0kb downstream 1000 false Bd3: 28797953-28798952 Brachypodium distachyon
Bradi3g27870 2.0kb upstream 2.0kb upstream 3899 true Bd3: 28794054-28797952 Brachypodium distachyon
Bradi3g27870 2.0kb upstream 2.0kb upstream 2000 false Bd3: 28794054-28796053 Brachypodium distachyon
Bradi3g27870 2.0kb downstream 2.0kb downstream 3899 true Bd3: 28796054-28799952 Brachypodium distachyon
Bradi3g27870 2.0kb downstream 2.0kb downstream 2000 false Bd3: 28797953-28799952 Brachypodium distachyon
Bradi3g27870 5.0kb upstream 5.0kb upstream 6899 true Bd3: 28791054-28797952 Brachypodium distachyon
Bradi3g27870 5.0kb upstream 5.0kb upstream 5000 false Bd3: 28791054-28796053 Brachypodium distachyon
Bradi3g27870 5.0kb downstream 5.0kb downstream 6899 true Bd3: 28796054-28802952 Brachypodium distachyon
Bradi3g27870 5.0kb downstream 5.0kb downstream 5000 false Bd3: 28797953-28802952 Brachypodium distachyon
Bradi3g27870 10.0kb upstream 10.0kb upstream 11899 true Bd3: 28786054-28797952 Brachypodium distachyon
Bradi3g27870 10.0kb upstream 10.0kb upstream 10000 false Bd3: 28786054-28796053 Brachypodium distachyon
Bradi3g27870 10.0kb downstream 10.0kb downstream 11899 true Bd3: 28796054-28807952 Brachypodium distachyon
Bradi3g27870 10.0kb downstream 10.0kb downstream 10000 false Bd3: 28797953-28807952 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580612 5269 Grass View MSA
122047818 5273 Angiosperm View MSA
121348418 5274 Embryophyte View MSA
123380857 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.173     High  
cufflinks 24.239     High  
cufflinks 24.774     High  
cufflinks 22.256     High  
cufflinks 14.414     High  
cufflinks 23.32     High  
cufflinks 23.843     High  
cufflinks 20.36     High  
cufflinks 21.884     High  
cufflinks 19.192     High  
cufflinks 4.945       Low
cufflinks 22.73     High  
cufflinks 5.295       Low
cufflinks 4.349       Low
cufflinks 11.418     High  
cufflinks 26.056     High  
cufflinks 20.583     High  
cufflinks 51.042     High High
cufflinks 21.629     High  
cufflinks 4.949       Low
cufflinks 69.778     High High
cufflinks 22.241     High  
cufflinks 19.695     High  
cufflinks 23.948     High  
cufflinks 24.429     High  
cufflinks 25.041     High  
cufflinks 6.007       Low
cufflinks 21.962     High  
cufflinks 23.012     High  
cufflinks 65.587     High High

0 Strain