Gene : Bradi3g27950 B. distachyon v3.1
Defline:  (1 of 1) 3.6.1.19 - Nucleoside-triphosphate diphosphatase / Nucleoside-triphosphate pyrophosphatase Genomic Order:  3332
Name:  ? Bradi3g27950 Secondary Identifier:  ? PAC:32812831
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-7184 Brachypodium distachyon pathologic  
Bdistachyon PWY-7206 Brachypodium distachyon pathologic  
Bdistachyon PWY-7211 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g27950 0.5kb upstream 0.5kb upstream 4018 true Bd3: 28914995-28919012 Brachypodium distachyon
Bradi3g27950 0.5kb upstream 0.5kb upstream 500 false Bd3: 28918513-28919012 Brachypodium distachyon
Bradi3g27950 0.5kb downstream 0.5kb downstream 4018 true Bd3: 28914495-28918512 Brachypodium distachyon
Bradi3g27950 0.5kb downstream 0.5kb downstream 500 false Bd3: 28914495-28914994 Brachypodium distachyon
Bradi3g27950 1.0kb upstream 1.0kb upstream 4518 true Bd3: 28914995-28919512 Brachypodium distachyon
Bradi3g27950 1.0kb upstream 1.0kb upstream 1000 false Bd3: 28918513-28919512 Brachypodium distachyon
Bradi3g27950 1.0kb downstream 1.0kb downstream 4518 true Bd3: 28913995-28918512 Brachypodium distachyon
Bradi3g27950 1.0kb downstream 1.0kb downstream 1000 false Bd3: 28913995-28914994 Brachypodium distachyon
Bradi3g27950 2.0kb upstream 2.0kb upstream 5518 true Bd3: 28914995-28920512 Brachypodium distachyon
Bradi3g27950 2.0kb upstream 2.0kb upstream 2000 false Bd3: 28918513-28920512 Brachypodium distachyon
Bradi3g27950 2.0kb downstream 2.0kb downstream 5518 true Bd3: 28912995-28918512 Brachypodium distachyon
Bradi3g27950 2.0kb downstream 2.0kb downstream 2000 false Bd3: 28912995-28914994 Brachypodium distachyon
Bradi3g27950 5.0kb upstream 5.0kb upstream 8518 true Bd3: 28914995-28923512 Brachypodium distachyon
Bradi3g27950 5.0kb upstream 5.0kb upstream 5000 false Bd3: 28918513-28923512 Brachypodium distachyon
Bradi3g27950 5.0kb downstream 5.0kb downstream 8518 true Bd3: 28909995-28918512 Brachypodium distachyon
Bradi3g27950 5.0kb downstream 5.0kb downstream 5000 false Bd3: 28909995-28914994 Brachypodium distachyon
Bradi3g27950 10.0kb upstream 10.0kb upstream 13518 true Bd3: 28914995-28928512 Brachypodium distachyon
Bradi3g27950 10.0kb upstream 10.0kb upstream 10000 false Bd3: 28918513-28928512 Brachypodium distachyon
Bradi3g27950 10.0kb downstream 10.0kb downstream 13518 true Bd3: 28904995-28918512 Brachypodium distachyon
Bradi3g27950 10.0kb downstream 10.0kb downstream 10000 false Bd3: 28904995-28914994 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580947 5269 Grass View MSA
122044439 5273 Angiosperm View MSA
121346203 5274 Embryophyte View MSA
123426243 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.978        
cufflinks 3.907        
cufflinks 3.936        
cufflinks 5.093        
cufflinks 3.283        
cufflinks 3.139        
cufflinks 3.813        
cufflinks 3.369        
cufflinks 2.938        
cufflinks 4.055        
cufflinks 2.478       Low
cufflinks 3.02        
cufflinks 2.396       Low
cufflinks 2.494       Low
cufflinks 3.728        
cufflinks 3.254        
cufflinks 6.379       High
cufflinks 6.225       High
cufflinks 7.55       High
cufflinks 2.5       Low
cufflinks 7.097       High
cufflinks 3.023        
cufflinks 3.071        
cufflinks 2.912        
cufflinks 4.044        
cufflinks 5.013        
cufflinks 2.709       Low
cufflinks 4.818        
cufflinks 3.453        
cufflinks 4.799        

0 Strain