Gene : Bradi3g27970 B. distachyon v3.1
Defline:  (1 of 1) K10779 - transcriptional regulator ATRX [EC:3.6.4.12] (ATRX) Genomic Order:  3334
Name:  ? Bradi3g27970 Secondary Identifier:  ? PAC:32818101
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g27970 0.5kb upstream 0.5kb upstream 14382 true Bd3: 28935983-28950364 Brachypodium distachyon
Bradi3g27970 0.5kb upstream 0.5kb upstream 500 false Bd3: 28935983-28936482 Brachypodium distachyon
Bradi3g27970 0.5kb downstream 0.5kb downstream 14382 true Bd3: 28936483-28950864 Brachypodium distachyon
Bradi3g27970 0.5kb downstream 0.5kb downstream 500 false Bd3: 28950365-28950864 Brachypodium distachyon
Bradi3g27970 1.0kb upstream 1.0kb upstream 14882 true Bd3: 28935483-28950364 Brachypodium distachyon
Bradi3g27970 1.0kb upstream 1.0kb upstream 1000 false Bd3: 28935483-28936482 Brachypodium distachyon
Bradi3g27970 1.0kb downstream 1.0kb downstream 14882 true Bd3: 28936483-28951364 Brachypodium distachyon
Bradi3g27970 1.0kb downstream 1.0kb downstream 1000 false Bd3: 28950365-28951364 Brachypodium distachyon
Bradi3g27970 2.0kb upstream 2.0kb upstream 15882 true Bd3: 28934483-28950364 Brachypodium distachyon
Bradi3g27970 2.0kb upstream 2.0kb upstream 2000 false Bd3: 28934483-28936482 Brachypodium distachyon
Bradi3g27970 2.0kb downstream 2.0kb downstream 15882 true Bd3: 28936483-28952364 Brachypodium distachyon
Bradi3g27970 2.0kb downstream 2.0kb downstream 2000 false Bd3: 28950365-28952364 Brachypodium distachyon
Bradi3g27970 5.0kb upstream 5.0kb upstream 18882 true Bd3: 28931483-28950364 Brachypodium distachyon
Bradi3g27970 5.0kb upstream 5.0kb upstream 5000 false Bd3: 28931483-28936482 Brachypodium distachyon
Bradi3g27970 5.0kb downstream 5.0kb downstream 18882 true Bd3: 28936483-28955364 Brachypodium distachyon
Bradi3g27970 5.0kb downstream 5.0kb downstream 5000 false Bd3: 28950365-28955364 Brachypodium distachyon
Bradi3g27970 10.0kb upstream 10.0kb upstream 23882 true Bd3: 28926483-28950364 Brachypodium distachyon
Bradi3g27970 10.0kb upstream 10.0kb upstream 10000 false Bd3: 28926483-28936482 Brachypodium distachyon
Bradi3g27970 10.0kb downstream 10.0kb downstream 23882 true Bd3: 28936483-28960364 Brachypodium distachyon
Bradi3g27970 10.0kb downstream 10.0kb downstream 10000 false Bd3: 28950365-28960364 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573273 5269 Grass View MSA
122043506 5273 Angiosperm View MSA
121348350 5274 Embryophyte View MSA
123428510 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.687        
cufflinks 1.38        
cufflinks 1.336        
cufflinks 1.025        
cufflinks 0.28       Low
cufflinks 1.169        
cufflinks 1.079        
cufflinks 0.817        
cufflinks 1.089        
cufflinks 0.543        
cufflinks 1.275        
cufflinks 1.148        
cufflinks 0.948        
cufflinks 0.904        
cufflinks 0.582        
cufflinks 1.195        
cufflinks 0.394       Low
cufflinks 1.741       High
cufflinks 0.496        
cufflinks 0.195       Low
cufflinks 0.663        
cufflinks 1.146        
cufflinks 0.786        
cufflinks 0.856        
cufflinks 0.988        
cufflinks 1.033        
cufflinks 1.132        
cufflinks 0.98        
cufflinks 0.99        
cufflinks 1.109        

0 Strain