Gene : Bradi3g28120 B. distachyon v3.1
Defline:  (1 of 1) PF07063 - Domain of unknown function (DUF1338) (DUF1338) Genomic Order:  3360
Name:  ? Bradi3g28120 Secondary Identifier:  ? PAC:32821006
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g28120 0.5kb upstream 0.5kb upstream 5826 true Bd3: 29236194-29242019 Brachypodium distachyon
Bradi3g28120 0.5kb upstream 0.5kb upstream 500 false Bd3: 29241520-29242019 Brachypodium distachyon
Bradi3g28120 0.5kb downstream 0.5kb downstream 5826 true Bd3: 29235694-29241519 Brachypodium distachyon
Bradi3g28120 0.5kb downstream 0.5kb downstream 500 false Bd3: 29235694-29236193 Brachypodium distachyon
Bradi3g28120 1.0kb upstream 1.0kb upstream 6326 true Bd3: 29236194-29242519 Brachypodium distachyon
Bradi3g28120 1.0kb upstream 1.0kb upstream 1000 false Bd3: 29241520-29242519 Brachypodium distachyon
Bradi3g28120 1.0kb downstream 1.0kb downstream 6326 true Bd3: 29235194-29241519 Brachypodium distachyon
Bradi3g28120 1.0kb downstream 1.0kb downstream 1000 false Bd3: 29235194-29236193 Brachypodium distachyon
Bradi3g28120 2.0kb upstream 2.0kb upstream 7326 true Bd3: 29236194-29243519 Brachypodium distachyon
Bradi3g28120 2.0kb upstream 2.0kb upstream 2000 false Bd3: 29241520-29243519 Brachypodium distachyon
Bradi3g28120 2.0kb downstream 2.0kb downstream 7326 true Bd3: 29234194-29241519 Brachypodium distachyon
Bradi3g28120 2.0kb downstream 2.0kb downstream 2000 false Bd3: 29234194-29236193 Brachypodium distachyon
Bradi3g28120 5.0kb upstream 5.0kb upstream 10326 true Bd3: 29236194-29246519 Brachypodium distachyon
Bradi3g28120 5.0kb upstream 5.0kb upstream 5000 false Bd3: 29241520-29246519 Brachypodium distachyon
Bradi3g28120 5.0kb downstream 5.0kb downstream 10326 true Bd3: 29231194-29241519 Brachypodium distachyon
Bradi3g28120 5.0kb downstream 5.0kb downstream 5000 false Bd3: 29231194-29236193 Brachypodium distachyon
Bradi3g28120 10.0kb upstream 10.0kb upstream 15326 true Bd3: 29236194-29251519 Brachypodium distachyon
Bradi3g28120 10.0kb upstream 10.0kb upstream 10000 false Bd3: 29241520-29251519 Brachypodium distachyon
Bradi3g28120 10.0kb downstream 10.0kb downstream 15326 true Bd3: 29226194-29241519 Brachypodium distachyon
Bradi3g28120 10.0kb downstream 10.0kb downstream 10000 false Bd3: 29226194-29236193 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570541 5269 Grass View MSA
122043338 5273 Angiosperm View MSA
121346049 5274 Embryophyte View MSA
123425162 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.356        
cufflinks 1.111        
cufflinks 1.497        
cufflinks 1.369        
cufflinks 9.136     High High
cufflinks 0.816        
cufflinks 1.164        
cufflinks 1.023        
cufflinks 0.904        
cufflinks 2.025        
cufflinks 1.575        
cufflinks 1.027        
cufflinks 0.871        
cufflinks 0.56       Low
cufflinks 1.197        
cufflinks 0.564       Low
cufflinks 1.292        
cufflinks 5.15        
cufflinks 24.594     High High
cufflinks 113.257     High High
cufflinks 8.002        
cufflinks 1.557        
cufflinks 1.497        
cufflinks 1.156        
cufflinks 1.043        
cufflinks 1.996        
cufflinks 3.773        
cufflinks 2.204        
cufflinks 1.839        
cufflinks 4.393        

0 Strain