Gene : Bradi3g28137 B. distachyon v3.1
Defline:  (1 of 1) PTHR10264:SF92 - HYPERSENSITIVE-INDUCED RESPONSE PROTEIN 1 Genomic Order:  3362
Name:  ? Bradi3g28137 Secondary Identifier:  ? PAC:32818064
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g28137 0.5kb upstream 0.5kb upstream 2017 true Bd3: 29242987-29245003 Brachypodium distachyon
Bradi3g28137 0.5kb upstream 0.5kb upstream 500 false Bd3: 29244504-29245003 Brachypodium distachyon
Bradi3g28137 0.5kb downstream 0.5kb downstream 2017 true Bd3: 29242487-29244503 Brachypodium distachyon
Bradi3g28137 0.5kb downstream 0.5kb downstream 500 false Bd3: 29242487-29242986 Brachypodium distachyon
Bradi3g28137 1.0kb upstream 1.0kb upstream 2517 true Bd3: 29242987-29245503 Brachypodium distachyon
Bradi3g28137 1.0kb upstream 1.0kb upstream 1000 false Bd3: 29244504-29245503 Brachypodium distachyon
Bradi3g28137 1.0kb downstream 1.0kb downstream 2517 true Bd3: 29241987-29244503 Brachypodium distachyon
Bradi3g28137 1.0kb downstream 1.0kb downstream 1000 false Bd3: 29241987-29242986 Brachypodium distachyon
Bradi3g28137 2.0kb upstream 2.0kb upstream 3517 true Bd3: 29242987-29246503 Brachypodium distachyon
Bradi3g28137 2.0kb upstream 2.0kb upstream 2000 false Bd3: 29244504-29246503 Brachypodium distachyon
Bradi3g28137 2.0kb downstream 2.0kb downstream 3517 true Bd3: 29240987-29244503 Brachypodium distachyon
Bradi3g28137 2.0kb downstream 2.0kb downstream 2000 false Bd3: 29240987-29242986 Brachypodium distachyon
Bradi3g28137 5.0kb upstream 5.0kb upstream 6517 true Bd3: 29242987-29249503 Brachypodium distachyon
Bradi3g28137 5.0kb upstream 5.0kb upstream 5000 false Bd3: 29244504-29249503 Brachypodium distachyon
Bradi3g28137 5.0kb downstream 5.0kb downstream 6517 true Bd3: 29237987-29244503 Brachypodium distachyon
Bradi3g28137 5.0kb downstream 5.0kb downstream 5000 false Bd3: 29237987-29242986 Brachypodium distachyon
Bradi3g28137 10.0kb upstream 10.0kb upstream 11517 true Bd3: 29242987-29254503 Brachypodium distachyon
Bradi3g28137 10.0kb upstream 10.0kb upstream 10000 false Bd3: 29244504-29254503 Brachypodium distachyon
Bradi3g28137 10.0kb downstream 10.0kb downstream 11517 true Bd3: 29232987-29244503 Brachypodium distachyon
Bradi3g28137 10.0kb downstream 10.0kb downstream 10000 false Bd3: 29232987-29242986 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027594 5273 Angiosperm View MSA
124591773 5269 Grass View MSA
121348601 5274 Embryophyte View MSA
123427890 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain