Gene : Bradi3g33365 B. distachyon v3.1
Defline:  (1 of 6) PTHR11410 - ATP SYNTHASE SUBUNIT A Genomic Order:  4036
Name:  ? Bradi3g33365 Secondary Identifier:  ? PAC:32817675
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-7219 Brachypodium distachyon pathologic  
Bdistachyon PWY-7229 Brachypodium distachyon pathologic  
Bdistachyon PWY-841 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g33365 0.5kb upstream 0.5kb upstream 911 true Bd3: 35485512-35486422 Brachypodium distachyon
Bradi3g33365 0.5kb upstream 0.5kb upstream 500 false Bd3: 35485923-35486422 Brachypodium distachyon
Bradi3g33365 0.5kb downstream 0.5kb downstream 911 true Bd3: 35485012-35485922 Brachypodium distachyon
Bradi3g33365 0.5kb downstream 0.5kb downstream 500 false Bd3: 35485012-35485511 Brachypodium distachyon
Bradi3g33365 1.0kb upstream 1.0kb upstream 1411 true Bd3: 35485512-35486922 Brachypodium distachyon
Bradi3g33365 1.0kb upstream 1.0kb upstream 1000 false Bd3: 35485923-35486922 Brachypodium distachyon
Bradi3g33365 1.0kb downstream 1.0kb downstream 1411 true Bd3: 35484512-35485922 Brachypodium distachyon
Bradi3g33365 1.0kb downstream 1.0kb downstream 1000 false Bd3: 35484512-35485511 Brachypodium distachyon
Bradi3g33365 2.0kb upstream 2.0kb upstream 2411 true Bd3: 35485512-35487922 Brachypodium distachyon
Bradi3g33365 2.0kb upstream 2.0kb upstream 2000 false Bd3: 35485923-35487922 Brachypodium distachyon
Bradi3g33365 2.0kb downstream 2.0kb downstream 2411 true Bd3: 35483512-35485922 Brachypodium distachyon
Bradi3g33365 2.0kb downstream 2.0kb downstream 2000 false Bd3: 35483512-35485511 Brachypodium distachyon
Bradi3g33365 5.0kb upstream 5.0kb upstream 5411 true Bd3: 35485512-35490922 Brachypodium distachyon
Bradi3g33365 5.0kb upstream 5.0kb upstream 5000 false Bd3: 35485923-35490922 Brachypodium distachyon
Bradi3g33365 5.0kb downstream 5.0kb downstream 5411 true Bd3: 35480512-35485922 Brachypodium distachyon
Bradi3g33365 5.0kb downstream 5.0kb downstream 5000 false Bd3: 35480512-35485511 Brachypodium distachyon
Bradi3g33365 10.0kb upstream 10.0kb upstream 10411 true Bd3: 35485512-35495922 Brachypodium distachyon
Bradi3g33365 10.0kb upstream 10.0kb upstream 10000 false Bd3: 35485923-35495922 Brachypodium distachyon
Bradi3g33365 10.0kb downstream 10.0kb downstream 10411 true Bd3: 35475512-35485922 Brachypodium distachyon
Bradi3g33365 10.0kb downstream 10.0kb downstream 10000 false Bd3: 35475512-35485511 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029216 5273 Angiosperm View MSA
124589363 5269 Grass View MSA
121348660 5274 Embryophyte View MSA
123428637 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.357        
cufflinks 0.614        
cufflinks 1.349        
cufflinks 1.135        
cufflinks 0.773        
cufflinks 0.385        
cufflinks 0.701        
cufflinks 0.436        
cufflinks 0.86        
cufflinks 2.678       High
cufflinks 1.487        
cufflinks 0.801        
cufflinks 0.985        
cufflinks 1.998       High
cufflinks 0.818        
cufflinks 0.644        
cufflinks 0.627        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.645        
cufflinks 1.859       High
cufflinks 0.383        
cufflinks 0.819        
cufflinks 0.416        
cufflinks 0.137       Low
cufflinks 0.803        
cufflinks 1.84       High
cufflinks 0.357        
cufflinks 1.907       High
cufflinks 1.62       High
cufflinks 0.639        

0 Strain