Gene : Bradi4g34980 B. distachyon v3.1
Defline:  (1 of 1) KOG3294 - WW domain binding protein WBP-2, contains GRAM domain Genomic Order:  4490
Name:  ? Bradi4g34980 Secondary Identifier:  ? PAC:32786359
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g34980 0.5kb upstream 0.5kb upstream 2770 true Bd4: 40449331-40452100 Brachypodium distachyon
Bradi4g34980 0.5kb upstream 0.5kb upstream 500 false Bd4: 40449331-40449830 Brachypodium distachyon
Bradi4g34980 0.5kb downstream 0.5kb downstream 2770 true Bd4: 40449831-40452600 Brachypodium distachyon
Bradi4g34980 0.5kb downstream 0.5kb downstream 500 false Bd4: 40452101-40452600 Brachypodium distachyon
Bradi4g34980 1.0kb upstream 1.0kb upstream 3270 true Bd4: 40448831-40452100 Brachypodium distachyon
Bradi4g34980 1.0kb upstream 1.0kb upstream 1000 false Bd4: 40448831-40449830 Brachypodium distachyon
Bradi4g34980 1.0kb downstream 1.0kb downstream 3270 true Bd4: 40449831-40453100 Brachypodium distachyon
Bradi4g34980 1.0kb downstream 1.0kb downstream 1000 false Bd4: 40452101-40453100 Brachypodium distachyon
Bradi4g34980 2.0kb upstream 2.0kb upstream 4270 true Bd4: 40447831-40452100 Brachypodium distachyon
Bradi4g34980 2.0kb upstream 2.0kb upstream 2000 false Bd4: 40447831-40449830 Brachypodium distachyon
Bradi4g34980 2.0kb downstream 2.0kb downstream 4270 true Bd4: 40449831-40454100 Brachypodium distachyon
Bradi4g34980 2.0kb downstream 2.0kb downstream 2000 false Bd4: 40452101-40454100 Brachypodium distachyon
Bradi4g34980 5.0kb upstream 5.0kb upstream 7270 true Bd4: 40444831-40452100 Brachypodium distachyon
Bradi4g34980 5.0kb upstream 5.0kb upstream 5000 false Bd4: 40444831-40449830 Brachypodium distachyon
Bradi4g34980 5.0kb downstream 5.0kb downstream 7270 true Bd4: 40449831-40457100 Brachypodium distachyon
Bradi4g34980 5.0kb downstream 5.0kb downstream 5000 false Bd4: 40452101-40457100 Brachypodium distachyon
Bradi4g34980 10.0kb upstream 10.0kb upstream 12270 true Bd4: 40439831-40452100 Brachypodium distachyon
Bradi4g34980 10.0kb upstream 10.0kb upstream 10000 false Bd4: 40439831-40449830 Brachypodium distachyon
Bradi4g34980 10.0kb downstream 10.0kb downstream 12270 true Bd4: 40449831-40462100 Brachypodium distachyon
Bradi4g34980 10.0kb downstream 10.0kb downstream 10000 false Bd4: 40452101-40462100 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124578210 5269 Grass View MSA
122045480 5273 Angiosperm View MSA
121350995 5274 Embryophyte View MSA
123424898 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.941     High  
cufflinks 15.729     High  
cufflinks 18.105     High  
cufflinks 14.801     High Low
cufflinks 37.204     High  
cufflinks 16.293     High  
cufflinks 18.633     High  
cufflinks 22.066     High  
cufflinks 17.444     High  
cufflinks 22.67     High  
cufflinks 23.4     High  
cufflinks 24.402     High  
cufflinks 20.008     High  
cufflinks 19.661     High  
cufflinks 22.693     High  
cufflinks 16.699     High  
cufflinks 25.363     High  
cufflinks 25.888     High  
cufflinks 43.737     High High
cufflinks 58.084     High High
cufflinks 28.415     High  
cufflinks 18.083     High  
cufflinks 22.657     High  
cufflinks 18.628     High  
cufflinks 16.301     High  
cufflinks 16.915     High  
cufflinks 19.674     High  
cufflinks 19.79     High  
cufflinks 17.755     High  
cufflinks 22.117     High  

0 Strain