Gene : Bradi4g34656 B. distachyon v3.1
Defline:  (1 of 1) PF14968 - Coiled coil protein 84 (CCDC84) Genomic Order:  4447
Name:  ? Bradi4g34656 Secondary Identifier:  ? PAC:32784850
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g34656 0.5kb upstream 0.5kb upstream 3830 true Bd4: 40105224-40109053 Brachypodium distachyon
Bradi4g34656 0.5kb upstream 0.5kb upstream 500 false Bd4: 40105224-40105723 Brachypodium distachyon
Bradi4g34656 0.5kb downstream 0.5kb downstream 3830 true Bd4: 40105724-40109553 Brachypodium distachyon
Bradi4g34656 0.5kb downstream 0.5kb downstream 500 false Bd4: 40109054-40109553 Brachypodium distachyon
Bradi4g34656 1.0kb upstream 1.0kb upstream 4330 true Bd4: 40104724-40109053 Brachypodium distachyon
Bradi4g34656 1.0kb upstream 1.0kb upstream 1000 false Bd4: 40104724-40105723 Brachypodium distachyon
Bradi4g34656 1.0kb downstream 1.0kb downstream 4330 true Bd4: 40105724-40110053 Brachypodium distachyon
Bradi4g34656 1.0kb downstream 1.0kb downstream 1000 false Bd4: 40109054-40110053 Brachypodium distachyon
Bradi4g34656 2.0kb upstream 2.0kb upstream 5330 true Bd4: 40103724-40109053 Brachypodium distachyon
Bradi4g34656 2.0kb upstream 2.0kb upstream 2000 false Bd4: 40103724-40105723 Brachypodium distachyon
Bradi4g34656 2.0kb downstream 2.0kb downstream 5330 true Bd4: 40105724-40111053 Brachypodium distachyon
Bradi4g34656 2.0kb downstream 2.0kb downstream 2000 false Bd4: 40109054-40111053 Brachypodium distachyon
Bradi4g34656 5.0kb upstream 5.0kb upstream 8330 true Bd4: 40100724-40109053 Brachypodium distachyon
Bradi4g34656 5.0kb upstream 5.0kb upstream 5000 false Bd4: 40100724-40105723 Brachypodium distachyon
Bradi4g34656 5.0kb downstream 5.0kb downstream 8330 true Bd4: 40105724-40114053 Brachypodium distachyon
Bradi4g34656 5.0kb downstream 5.0kb downstream 5000 false Bd4: 40109054-40114053 Brachypodium distachyon
Bradi4g34656 10.0kb upstream 10.0kb upstream 13330 true Bd4: 40095724-40109053 Brachypodium distachyon
Bradi4g34656 10.0kb upstream 10.0kb upstream 10000 false Bd4: 40095724-40105723 Brachypodium distachyon
Bradi4g34656 10.0kb downstream 10.0kb downstream 13330 true Bd4: 40105724-40119053 Brachypodium distachyon
Bradi4g34656 10.0kb downstream 10.0kb downstream 10000 false Bd4: 40109054-40119053 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576144 5269 Grass View MSA
122044332 5273 Angiosperm View MSA
121347668 5274 Embryophyte View MSA
123380595 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.327        
cufflinks 0.538        
cufflinks 0.592        
cufflinks 0.777       High
cufflinks 0.256        
cufflinks 0.533        
cufflinks 0.543        
cufflinks 0.584        
cufflinks 0.832       High
cufflinks 0.369        
cufflinks 0.448        
cufflinks 0.549        
cufflinks 0.359        
cufflinks 0.434        
cufflinks 0.34        
cufflinks 0.598        
cufflinks 0.358        
cufflinks 0.605        
cufflinks 0.502        
cufflinks 0.18       Low
cufflinks 0.436        
cufflinks 0.702        
cufflinks 0.521        
cufflinks 0.461        
cufflinks 0.446        
cufflinks 0.756        
cufflinks 0.329        
cufflinks 0.561        
cufflinks 0.784       High
cufflinks 0.418        

0 Strain