Gene : Bradi3g34310 B. distachyon v3.1
Defline:  (1 of 1) PTHR31394:SF1 - TRANSMEMBRANE PROTEIN 199 Genomic Order:  4175
Name:  ? Bradi3g34310 Secondary Identifier:  ? PAC:32822386
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g34310 0.5kb upstream 0.5kb upstream 5623 true Bd3: 36478698-36484320 Brachypodium distachyon
Bradi3g34310 0.5kb upstream 0.5kb upstream 500 false Bd3: 36478698-36479197 Brachypodium distachyon
Bradi3g34310 0.5kb downstream 0.5kb downstream 5623 true Bd3: 36479198-36484820 Brachypodium distachyon
Bradi3g34310 0.5kb downstream 0.5kb downstream 500 false Bd3: 36484321-36484820 Brachypodium distachyon
Bradi3g34310 1.0kb upstream 1.0kb upstream 6123 true Bd3: 36478198-36484320 Brachypodium distachyon
Bradi3g34310 1.0kb upstream 1.0kb upstream 1000 false Bd3: 36478198-36479197 Brachypodium distachyon
Bradi3g34310 1.0kb downstream 1.0kb downstream 6123 true Bd3: 36479198-36485320 Brachypodium distachyon
Bradi3g34310 1.0kb downstream 1.0kb downstream 1000 false Bd3: 36484321-36485320 Brachypodium distachyon
Bradi3g34310 2.0kb upstream 2.0kb upstream 7123 true Bd3: 36477198-36484320 Brachypodium distachyon
Bradi3g34310 2.0kb upstream 2.0kb upstream 2000 false Bd3: 36477198-36479197 Brachypodium distachyon
Bradi3g34310 2.0kb downstream 2.0kb downstream 7123 true Bd3: 36479198-36486320 Brachypodium distachyon
Bradi3g34310 2.0kb downstream 2.0kb downstream 2000 false Bd3: 36484321-36486320 Brachypodium distachyon
Bradi3g34310 5.0kb upstream 5.0kb upstream 10123 true Bd3: 36474198-36484320 Brachypodium distachyon
Bradi3g34310 5.0kb upstream 5.0kb upstream 5000 false Bd3: 36474198-36479197 Brachypodium distachyon
Bradi3g34310 5.0kb downstream 5.0kb downstream 10123 true Bd3: 36479198-36489320 Brachypodium distachyon
Bradi3g34310 5.0kb downstream 5.0kb downstream 5000 false Bd3: 36484321-36489320 Brachypodium distachyon
Bradi3g34310 10.0kb upstream 10.0kb upstream 15123 true Bd3: 36469198-36484320 Brachypodium distachyon
Bradi3g34310 10.0kb upstream 10.0kb upstream 10000 false Bd3: 36469198-36479197 Brachypodium distachyon
Bradi3g34310 10.0kb downstream 10.0kb downstream 15123 true Bd3: 36479198-36494320 Brachypodium distachyon
Bradi3g34310 10.0kb downstream 10.0kb downstream 10000 false Bd3: 36484321-36494320 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577249 5269 Grass View MSA
122047904 5273 Angiosperm View MSA
121346393 5274 Embryophyte View MSA
123426086 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.001        
cufflinks 1.898        
cufflinks 2.345        
cufflinks 2.024        
cufflinks 2.232        
cufflinks 1.658       Low
cufflinks 2.153        
cufflinks 2.1        
cufflinks 1.934        
cufflinks 2.551        
cufflinks 2.127        
cufflinks 1.376       Low
cufflinks 1.918        
cufflinks 1.914        
cufflinks 1.707        
cufflinks 1.895        
cufflinks 2.321        
cufflinks 3.308       High
cufflinks 3.124       High
cufflinks 1.788        
cufflinks 2.728        
cufflinks 2.143        
cufflinks 1.9        
cufflinks 1.713        
cufflinks 1.779        
cufflinks 2.413        
cufflinks 2.319        
cufflinks 2.572        
cufflinks 2.452        
cufflinks 1.975        

0 Strain