Gene : Bradi3g34260 B. distachyon v3.1
Defline:  (1 of 1) K00630 - glycerol-3-phosphate O-acyltransferase (ATS1) Genomic Order:  4165
Name:  ? Bradi3g34260 Secondary Identifier:  ? PAC:32814080
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY0-1319 Brachypodium distachyon pathologic  
Bdistachyon PWY4FS-7 Brachypodium distachyon pathologic  
Bdistachyon PWY-7411 Brachypodium distachyon pathologic  
Bdistachyon TRIGLSYN-PWY Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g34260 0.5kb upstream 0.5kb upstream 6838 true Bd3: 36430344-36437181 Brachypodium distachyon
Bradi3g34260 0.5kb upstream 0.5kb upstream 500 false Bd3: 36430344-36430843 Brachypodium distachyon
Bradi3g34260 0.5kb downstream 0.5kb downstream 6838 true Bd3: 36430844-36437681 Brachypodium distachyon
Bradi3g34260 0.5kb downstream 0.5kb downstream 500 false Bd3: 36437182-36437681 Brachypodium distachyon
Bradi3g34260 1.0kb upstream 1.0kb upstream 7338 true Bd3: 36429844-36437181 Brachypodium distachyon
Bradi3g34260 1.0kb upstream 1.0kb upstream 1000 false Bd3: 36429844-36430843 Brachypodium distachyon
Bradi3g34260 1.0kb downstream 1.0kb downstream 7338 true Bd3: 36430844-36438181 Brachypodium distachyon
Bradi3g34260 1.0kb downstream 1.0kb downstream 1000 false Bd3: 36437182-36438181 Brachypodium distachyon
Bradi3g34260 2.0kb upstream 2.0kb upstream 8338 true Bd3: 36428844-36437181 Brachypodium distachyon
Bradi3g34260 2.0kb upstream 2.0kb upstream 2000 false Bd3: 36428844-36430843 Brachypodium distachyon
Bradi3g34260 2.0kb downstream 2.0kb downstream 8338 true Bd3: 36430844-36439181 Brachypodium distachyon
Bradi3g34260 2.0kb downstream 2.0kb downstream 2000 false Bd3: 36437182-36439181 Brachypodium distachyon
Bradi3g34260 5.0kb upstream 5.0kb upstream 11338 true Bd3: 36425844-36437181 Brachypodium distachyon
Bradi3g34260 5.0kb upstream 5.0kb upstream 5000 false Bd3: 36425844-36430843 Brachypodium distachyon
Bradi3g34260 5.0kb downstream 5.0kb downstream 11338 true Bd3: 36430844-36442181 Brachypodium distachyon
Bradi3g34260 5.0kb downstream 5.0kb downstream 5000 false Bd3: 36437182-36442181 Brachypodium distachyon
Bradi3g34260 10.0kb upstream 10.0kb upstream 16338 true Bd3: 36420844-36437181 Brachypodium distachyon
Bradi3g34260 10.0kb upstream 10.0kb upstream 10000 false Bd3: 36420844-36430843 Brachypodium distachyon
Bradi3g34260 10.0kb downstream 10.0kb downstream 16338 true Bd3: 36430844-36447181 Brachypodium distachyon
Bradi3g34260 10.0kb downstream 10.0kb downstream 10000 false Bd3: 36437182-36447181 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124583790 5269 Grass View MSA
122046647 5273 Angiosperm View MSA
121346869 5274 Embryophyte View MSA
123424445 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.55        
cufflinks 4.911       High
cufflinks 4.713       High
cufflinks 4.763       High
cufflinks 2.254       Low
cufflinks 4.285       High
cufflinks 4.316       High
cufflinks 3.175        
cufflinks 3.701        
cufflinks 3.078        
cufflinks 2.834        
cufflinks 3.265        
cufflinks 3.288        
cufflinks 2.728        
cufflinks 2.718        
cufflinks 4.076        
cufflinks 2.902        
cufflinks 2.051       Low
cufflinks 2.565        
cufflinks 1.695       Low
cufflinks 2.3        
cufflinks 3.54        
cufflinks 3.147        
cufflinks 3.726        
cufflinks 4.309       High
cufflinks 4.391       High
cufflinks 4.16        
cufflinks 4.087        
cufflinks 3.831        
cufflinks 2.911        

0 Strain