Gene : Bradi3g34400 B. distachyon v3.1
Defline:  (1 of 2) PTHR31906:SF5 - PLASTID-LIPID-ASSOCIATED PROTEIN 3, CHLOROPLASTIC-RELATED Genomic Order:  4186
Name:  ? Bradi3g34400 Secondary Identifier:  ? PAC:32817499
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g34400 0.5kb upstream 0.5kb upstream 2800 true Bd3: 36546055-36548854 Brachypodium distachyon
Bradi3g34400 0.5kb upstream 0.5kb upstream 500 false Bd3: 36548355-36548854 Brachypodium distachyon
Bradi3g34400 0.5kb downstream 0.5kb downstream 2800 true Bd3: 36545555-36548354 Brachypodium distachyon
Bradi3g34400 0.5kb downstream 0.5kb downstream 500 false Bd3: 36545555-36546054 Brachypodium distachyon
Bradi3g34400 1.0kb upstream 1.0kb upstream 3300 true Bd3: 36546055-36549354 Brachypodium distachyon
Bradi3g34400 1.0kb upstream 1.0kb upstream 1000 false Bd3: 36548355-36549354 Brachypodium distachyon
Bradi3g34400 1.0kb downstream 1.0kb downstream 3300 true Bd3: 36545055-36548354 Brachypodium distachyon
Bradi3g34400 1.0kb downstream 1.0kb downstream 1000 false Bd3: 36545055-36546054 Brachypodium distachyon
Bradi3g34400 2.0kb upstream 2.0kb upstream 4300 true Bd3: 36546055-36550354 Brachypodium distachyon
Bradi3g34400 2.0kb upstream 2.0kb upstream 2000 false Bd3: 36548355-36550354 Brachypodium distachyon
Bradi3g34400 2.0kb downstream 2.0kb downstream 4300 true Bd3: 36544055-36548354 Brachypodium distachyon
Bradi3g34400 2.0kb downstream 2.0kb downstream 2000 false Bd3: 36544055-36546054 Brachypodium distachyon
Bradi3g34400 5.0kb upstream 5.0kb upstream 7300 true Bd3: 36546055-36553354 Brachypodium distachyon
Bradi3g34400 5.0kb upstream 5.0kb upstream 5000 false Bd3: 36548355-36553354 Brachypodium distachyon
Bradi3g34400 5.0kb downstream 5.0kb downstream 7300 true Bd3: 36541055-36548354 Brachypodium distachyon
Bradi3g34400 5.0kb downstream 5.0kb downstream 5000 false Bd3: 36541055-36546054 Brachypodium distachyon
Bradi3g34400 10.0kb upstream 10.0kb upstream 12300 true Bd3: 36546055-36558354 Brachypodium distachyon
Bradi3g34400 10.0kb upstream 10.0kb upstream 10000 false Bd3: 36548355-36558354 Brachypodium distachyon
Bradi3g34400 10.0kb downstream 10.0kb downstream 12300 true Bd3: 36536055-36548354 Brachypodium distachyon
Bradi3g34400 10.0kb downstream 10.0kb downstream 10000 false Bd3: 36536055-36546054 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571593 5269 Grass View MSA
122048215 5273 Angiosperm View MSA
121346450 5274 Embryophyte View MSA
123427802 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 121.61     High  
cufflinks 45.525     High  
cufflinks 43.923     High  
cufflinks 52.07     High  
cufflinks 77.892     High  
cufflinks 63.498     High  
cufflinks 55.332     High  
cufflinks 81.13     High  
cufflinks 73.98     High  
cufflinks 62.595     High  
cufflinks 140.814     High High
cufflinks 67.18     High  
cufflinks 132.377     High  
cufflinks 170.326     High High
cufflinks 92.328     High  
cufflinks 63.696     High  
cufflinks 103.658     High  
cufflinks 2.949       Low
cufflinks 84.652     High  
cufflinks 72.162     High  
cufflinks 41.55     High  
cufflinks 53.884     High  
cufflinks 86.661     High  
cufflinks 92.992     High  
cufflinks 74.013     High  
cufflinks 44.346     High  
cufflinks 133.829     High High
cufflinks 51.01     High  
cufflinks 56.481     High  
cufflinks 16.032     High Low

0 Strain