Gene : Bradi4g34460 B. distachyon v3.1
Defline:  (1 of 1) PTHR21027 - TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN54 Genomic Order:  4427
Name:  ? Bradi4g34460 Secondary Identifier:  ? PAC:32786721
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi4g34460 0.5kb upstream 0.5kb upstream 3120 true Bd4: 39983671-39986790 Brachypodium distachyon
Bradi4g34460 0.5kb upstream 0.5kb upstream 500 false Bd4: 39983671-39984170 Brachypodium distachyon
Bradi4g34460 0.5kb downstream 0.5kb downstream 3120 true Bd4: 39984171-39987290 Brachypodium distachyon
Bradi4g34460 0.5kb downstream 0.5kb downstream 500 false Bd4: 39986791-39987290 Brachypodium distachyon
Bradi4g34460 1.0kb upstream 1.0kb upstream 3620 true Bd4: 39983171-39986790 Brachypodium distachyon
Bradi4g34460 1.0kb upstream 1.0kb upstream 1000 false Bd4: 39983171-39984170 Brachypodium distachyon
Bradi4g34460 1.0kb downstream 1.0kb downstream 3620 true Bd4: 39984171-39987790 Brachypodium distachyon
Bradi4g34460 1.0kb downstream 1.0kb downstream 1000 false Bd4: 39986791-39987790 Brachypodium distachyon
Bradi4g34460 2.0kb upstream 2.0kb upstream 4620 true Bd4: 39982171-39986790 Brachypodium distachyon
Bradi4g34460 2.0kb upstream 2.0kb upstream 2000 false Bd4: 39982171-39984170 Brachypodium distachyon
Bradi4g34460 2.0kb downstream 2.0kb downstream 4620 true Bd4: 39984171-39988790 Brachypodium distachyon
Bradi4g34460 2.0kb downstream 2.0kb downstream 2000 false Bd4: 39986791-39988790 Brachypodium distachyon
Bradi4g34460 5.0kb upstream 5.0kb upstream 7620 true Bd4: 39979171-39986790 Brachypodium distachyon
Bradi4g34460 5.0kb upstream 5.0kb upstream 5000 false Bd4: 39979171-39984170 Brachypodium distachyon
Bradi4g34460 5.0kb downstream 5.0kb downstream 7620 true Bd4: 39984171-39991790 Brachypodium distachyon
Bradi4g34460 5.0kb downstream 5.0kb downstream 5000 false Bd4: 39986791-39991790 Brachypodium distachyon
Bradi4g34460 10.0kb upstream 10.0kb upstream 12620 true Bd4: 39974171-39986790 Brachypodium distachyon
Bradi4g34460 10.0kb upstream 10.0kb upstream 10000 false Bd4: 39974171-39984170 Brachypodium distachyon
Bradi4g34460 10.0kb downstream 10.0kb downstream 12620 true Bd4: 39984171-39996790 Brachypodium distachyon
Bradi4g34460 10.0kb downstream 10.0kb downstream 10000 false Bd4: 39986791-39996790 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569312 5269 Grass View MSA
122051332 5273 Angiosperm View MSA
121351548 5274 Embryophyte View MSA
123382220 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.608        
cufflinks 0.972        
cufflinks 0.915        
cufflinks 1.212        
cufflinks 0.974        
cufflinks 0.473        
cufflinks 0.601        
cufflinks 0.232       Low
cufflinks 0.356        
cufflinks 0.426        
cufflinks 0.26       Low
cufflinks 0.357        
cufflinks 0.12       Low
cufflinks 0.092       Low
cufflinks 0.217       Low
cufflinks 0.459        
cufflinks 0.703        
cufflinks 1.782       High
cufflinks 1.369       High
cufflinks 3.168       High
cufflinks 1.149        
cufflinks 0.479        
cufflinks 0.391        
cufflinks 0.336        
cufflinks 0.635        
cufflinks 0.842        
cufflinks 0.4        
cufflinks 0.918        
cufflinks 0.848        
cufflinks 0.7        

0 Strain