Gene : Bradi3g34557 B. distachyon v3.1
Defline:  (1 of 1) PTHR12910:SF2 - NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 12 Genomic Order:  4205
Name:  ? Bradi3g34557 Secondary Identifier:  ? PAC:32821461
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-3781 Brachypodium distachyon pathologic  
Bdistachyon PWY-4302 Brachypodium distachyon pathologic  
Bdistachyon PWY-5083 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g34557 0.5kb upstream 0.5kb upstream 4256 true Bd3: 36665744-36669999 Brachypodium distachyon
Bradi3g34557 0.5kb upstream 0.5kb upstream 500 false Bd3: 36669500-36669999 Brachypodium distachyon
Bradi3g34557 0.5kb downstream 0.5kb downstream 4256 true Bd3: 36665244-36669499 Brachypodium distachyon
Bradi3g34557 0.5kb downstream 0.5kb downstream 500 false Bd3: 36665244-36665743 Brachypodium distachyon
Bradi3g34557 1.0kb upstream 1.0kb upstream 4756 true Bd3: 36665744-36670499 Brachypodium distachyon
Bradi3g34557 1.0kb upstream 1.0kb upstream 1000 false Bd3: 36669500-36670499 Brachypodium distachyon
Bradi3g34557 1.0kb downstream 1.0kb downstream 4756 true Bd3: 36664744-36669499 Brachypodium distachyon
Bradi3g34557 1.0kb downstream 1.0kb downstream 1000 false Bd3: 36664744-36665743 Brachypodium distachyon
Bradi3g34557 2.0kb upstream 2.0kb upstream 5756 true Bd3: 36665744-36671499 Brachypodium distachyon
Bradi3g34557 2.0kb upstream 2.0kb upstream 2000 false Bd3: 36669500-36671499 Brachypodium distachyon
Bradi3g34557 2.0kb downstream 2.0kb downstream 5756 true Bd3: 36663744-36669499 Brachypodium distachyon
Bradi3g34557 2.0kb downstream 2.0kb downstream 2000 false Bd3: 36663744-36665743 Brachypodium distachyon
Bradi3g34557 5.0kb upstream 5.0kb upstream 8756 true Bd3: 36665744-36674499 Brachypodium distachyon
Bradi3g34557 5.0kb upstream 5.0kb upstream 5000 false Bd3: 36669500-36674499 Brachypodium distachyon
Bradi3g34557 5.0kb downstream 5.0kb downstream 8756 true Bd3: 36660744-36669499 Brachypodium distachyon
Bradi3g34557 5.0kb downstream 5.0kb downstream 5000 false Bd3: 36660744-36665743 Brachypodium distachyon
Bradi3g34557 10.0kb upstream 10.0kb upstream 13756 true Bd3: 36665744-36679499 Brachypodium distachyon
Bradi3g34557 10.0kb upstream 10.0kb upstream 10000 false Bd3: 36669500-36679499 Brachypodium distachyon
Bradi3g34557 10.0kb downstream 10.0kb downstream 13756 true Bd3: 36655744-36669499 Brachypodium distachyon
Bradi3g34557 10.0kb downstream 10.0kb downstream 10000 false Bd3: 36655744-36665743 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570493 5269 Grass View MSA
122043638 5273 Angiosperm View MSA
121345011 5274 Embryophyte View MSA
123426349 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.28     High  
cufflinks 22.455     High  
cufflinks 21.222     High  
cufflinks 32.64     High  
cufflinks 28.492     High  
cufflinks 20.958     High  
cufflinks 19.648     High  
cufflinks 20.027     High  
cufflinks 21.98     High  
cufflinks 40.319     High  
cufflinks 12.109     High Low
cufflinks 21.501     High  
cufflinks 13.109     High Low
cufflinks 14.836     High Low
cufflinks 29.321     High  
cufflinks 21.001     High  
cufflinks 42.144     High High
cufflinks 32.049     High  
cufflinks 24.418     High  
cufflinks 33.979     High  
cufflinks 44.927     High High
cufflinks 19.101     High  
cufflinks 19.78     High  
cufflinks 21.389     High  
cufflinks 27.953     High  
cufflinks 34.015     High  
cufflinks 14.788     High Low
cufflinks 30.686     High  
cufflinks 25.277     High  
cufflinks 32.46     High  

0 Strain