Gene : Bradi3g34540 B. distachyon v3.1
Defline:  (1 of 1) PTHR13018:SF47 - ERD (EARLY-RESPONSIVE TO DEHYDRATION STRESS) FAMILY PROTEIN-RELATED Genomic Order:  4203
Name:  ? Bradi3g34540 Secondary Identifier:  ? PAC:32815290
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g34540 0.5kb upstream 0.5kb upstream 6056 true Bd3: 36652207-36658262 Brachypodium distachyon
Bradi3g34540 0.5kb upstream 0.5kb upstream 500 false Bd3: 36657763-36658262 Brachypodium distachyon
Bradi3g34540 0.5kb downstream 0.5kb downstream 6056 true Bd3: 36651707-36657762 Brachypodium distachyon
Bradi3g34540 0.5kb downstream 0.5kb downstream 500 false Bd3: 36651707-36652206 Brachypodium distachyon
Bradi3g34540 1.0kb upstream 1.0kb upstream 6556 true Bd3: 36652207-36658762 Brachypodium distachyon
Bradi3g34540 1.0kb upstream 1.0kb upstream 1000 false Bd3: 36657763-36658762 Brachypodium distachyon
Bradi3g34540 1.0kb downstream 1.0kb downstream 6556 true Bd3: 36651207-36657762 Brachypodium distachyon
Bradi3g34540 1.0kb downstream 1.0kb downstream 1000 false Bd3: 36651207-36652206 Brachypodium distachyon
Bradi3g34540 2.0kb upstream 2.0kb upstream 7556 true Bd3: 36652207-36659762 Brachypodium distachyon
Bradi3g34540 2.0kb upstream 2.0kb upstream 2000 false Bd3: 36657763-36659762 Brachypodium distachyon
Bradi3g34540 2.0kb downstream 2.0kb downstream 7556 true Bd3: 36650207-36657762 Brachypodium distachyon
Bradi3g34540 2.0kb downstream 2.0kb downstream 2000 false Bd3: 36650207-36652206 Brachypodium distachyon
Bradi3g34540 5.0kb upstream 5.0kb upstream 10556 true Bd3: 36652207-36662762 Brachypodium distachyon
Bradi3g34540 5.0kb upstream 5.0kb upstream 5000 false Bd3: 36657763-36662762 Brachypodium distachyon
Bradi3g34540 5.0kb downstream 5.0kb downstream 10556 true Bd3: 36647207-36657762 Brachypodium distachyon
Bradi3g34540 5.0kb downstream 5.0kb downstream 5000 false Bd3: 36647207-36652206 Brachypodium distachyon
Bradi3g34540 10.0kb upstream 10.0kb upstream 15556 true Bd3: 36652207-36667762 Brachypodium distachyon
Bradi3g34540 10.0kb upstream 10.0kb upstream 10000 false Bd3: 36657763-36667762 Brachypodium distachyon
Bradi3g34540 10.0kb downstream 10.0kb downstream 15556 true Bd3: 36642207-36657762 Brachypodium distachyon
Bradi3g34540 10.0kb downstream 10.0kb downstream 10000 false Bd3: 36642207-36652206 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570589 5269 Grass View MSA
122046937 5273 Angiosperm View MSA
123429118 5275 Viridiplantae View MSA
121350338 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.516       Low
cufflinks 5.419        
cufflinks 4.818        
cufflinks 3.729        
cufflinks 1.624       Low
cufflinks 3.859        
cufflinks 4.073        
cufflinks 3.268        
cufflinks 3.167        
cufflinks 2.338        
cufflinks 1.798        
cufflinks 4.712        
cufflinks 2.296        
cufflinks 1.254       Low
cufflinks 2.692        
cufflinks 4.154        
cufflinks 1.789        
cufflinks 9.282       High
cufflinks 5.864       High
cufflinks 2.382        
cufflinks 2.329        
cufflinks 4.574        
cufflinks 3.213        
cufflinks 2.895        
cufflinks 2.829        
cufflinks 4.05        
cufflinks 1.766        
cufflinks 3.963        
cufflinks 3.95        
cufflinks 6.301       High

0 Strain