Gene : Bradi3g31120 B. distachyon v3.1
Defline:  (1 of 1) K10849 - DNA excision repair protein ERCC-1 (ERCC1) Genomic Order:  3759
Name:  ? Bradi3g31120 Secondary Identifier:  ? PAC:32818204
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g31120 0.5kb upstream 0.5kb upstream 3845 true Bd3: 33015409-33019253 Brachypodium distachyon
Bradi3g31120 0.5kb upstream 0.5kb upstream 500 false Bd3: 33018754-33019253 Brachypodium distachyon
Bradi3g31120 0.5kb downstream 0.5kb downstream 3845 true Bd3: 33014909-33018753 Brachypodium distachyon
Bradi3g31120 0.5kb downstream 0.5kb downstream 500 false Bd3: 33014909-33015408 Brachypodium distachyon
Bradi3g31120 1.0kb upstream 1.0kb upstream 4345 true Bd3: 33015409-33019753 Brachypodium distachyon
Bradi3g31120 1.0kb upstream 1.0kb upstream 1000 false Bd3: 33018754-33019753 Brachypodium distachyon
Bradi3g31120 1.0kb downstream 1.0kb downstream 4345 true Bd3: 33014409-33018753 Brachypodium distachyon
Bradi3g31120 1.0kb downstream 1.0kb downstream 1000 false Bd3: 33014409-33015408 Brachypodium distachyon
Bradi3g31120 2.0kb upstream 2.0kb upstream 5345 true Bd3: 33015409-33020753 Brachypodium distachyon
Bradi3g31120 2.0kb upstream 2.0kb upstream 2000 false Bd3: 33018754-33020753 Brachypodium distachyon
Bradi3g31120 2.0kb downstream 2.0kb downstream 5345 true Bd3: 33013409-33018753 Brachypodium distachyon
Bradi3g31120 2.0kb downstream 2.0kb downstream 2000 false Bd3: 33013409-33015408 Brachypodium distachyon
Bradi3g31120 5.0kb upstream 5.0kb upstream 8345 true Bd3: 33015409-33023753 Brachypodium distachyon
Bradi3g31120 5.0kb upstream 5.0kb upstream 5000 false Bd3: 33018754-33023753 Brachypodium distachyon
Bradi3g31120 5.0kb downstream 5.0kb downstream 8345 true Bd3: 33010409-33018753 Brachypodium distachyon
Bradi3g31120 5.0kb downstream 5.0kb downstream 5000 false Bd3: 33010409-33015408 Brachypodium distachyon
Bradi3g31120 10.0kb upstream 10.0kb upstream 13345 true Bd3: 33015409-33028753 Brachypodium distachyon
Bradi3g31120 10.0kb upstream 10.0kb upstream 10000 false Bd3: 33018754-33028753 Brachypodium distachyon
Bradi3g31120 10.0kb downstream 10.0kb downstream 13345 true Bd3: 33005409-33018753 Brachypodium distachyon
Bradi3g31120 10.0kb downstream 10.0kb downstream 10000 false Bd3: 33005409-33015408 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124580344 5269 Grass View MSA
122045728 5273 Angiosperm View MSA
121344888 5274 Embryophyte View MSA
123427474 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.118        
cufflinks 2.005        
cufflinks 2.242        
cufflinks 1.716        
cufflinks 1.282       Low
cufflinks 2.166        
cufflinks 2.168        
cufflinks 1.803        
cufflinks 1.892        
cufflinks 1.788        
cufflinks 3.326       High
cufflinks 1.877        
cufflinks 2.046        
cufflinks 2.232        
cufflinks 1.972        
cufflinks 1.956        
cufflinks 2.237        
cufflinks 3.237       High
cufflinks 2.48        
cufflinks 1.156       Low
cufflinks 1.985        
cufflinks 1.951        
cufflinks 1.833        
cufflinks 1.826        
cufflinks 1.852        
cufflinks 2.119        
cufflinks 2.453        
cufflinks 2.185        
cufflinks 1.983        
cufflinks 1.928        

0 Strain