Gene : Bradi3g31397 B. distachyon v3.1
Defline:  (1 of 1) PTHR21320:SF0 - METHYLTRANSFERASE-LIKE PROTEIN 17, MITOCHONDRIAL Genomic Order:  3769
Name:  ? Bradi3g31397 Secondary Identifier:  ? PAC:32813480
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g31397 0.5kb upstream 0.5kb upstream 4580 true Bd3: 33274983-33279562 Brachypodium distachyon
Bradi3g31397 0.5kb upstream 0.5kb upstream 500 false Bd3: 33279063-33279562 Brachypodium distachyon
Bradi3g31397 0.5kb downstream 0.5kb downstream 4580 true Bd3: 33274483-33279062 Brachypodium distachyon
Bradi3g31397 0.5kb downstream 0.5kb downstream 500 false Bd3: 33274483-33274982 Brachypodium distachyon
Bradi3g31397 1.0kb upstream 1.0kb upstream 5080 true Bd3: 33274983-33280062 Brachypodium distachyon
Bradi3g31397 1.0kb upstream 1.0kb upstream 1000 false Bd3: 33279063-33280062 Brachypodium distachyon
Bradi3g31397 1.0kb downstream 1.0kb downstream 5080 true Bd3: 33273983-33279062 Brachypodium distachyon
Bradi3g31397 1.0kb downstream 1.0kb downstream 1000 false Bd3: 33273983-33274982 Brachypodium distachyon
Bradi3g31397 2.0kb upstream 2.0kb upstream 6080 true Bd3: 33274983-33281062 Brachypodium distachyon
Bradi3g31397 2.0kb upstream 2.0kb upstream 2000 false Bd3: 33279063-33281062 Brachypodium distachyon
Bradi3g31397 2.0kb downstream 2.0kb downstream 6080 true Bd3: 33272983-33279062 Brachypodium distachyon
Bradi3g31397 2.0kb downstream 2.0kb downstream 2000 false Bd3: 33272983-33274982 Brachypodium distachyon
Bradi3g31397 5.0kb upstream 5.0kb upstream 9080 true Bd3: 33274983-33284062 Brachypodium distachyon
Bradi3g31397 5.0kb upstream 5.0kb upstream 5000 false Bd3: 33279063-33284062 Brachypodium distachyon
Bradi3g31397 5.0kb downstream 5.0kb downstream 9080 true Bd3: 33269983-33279062 Brachypodium distachyon
Bradi3g31397 5.0kb downstream 5.0kb downstream 5000 false Bd3: 33269983-33274982 Brachypodium distachyon
Bradi3g31397 10.0kb upstream 10.0kb upstream 14080 true Bd3: 33274983-33289062 Brachypodium distachyon
Bradi3g31397 10.0kb upstream 10.0kb upstream 10000 false Bd3: 33279063-33289062 Brachypodium distachyon
Bradi3g31397 10.0kb downstream 10.0kb downstream 14080 true Bd3: 33264983-33279062 Brachypodium distachyon
Bradi3g31397 10.0kb downstream 10.0kb downstream 10000 false Bd3: 33264983-33274982 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576913 5269 Grass View MSA
122046431 5273 Angiosperm View MSA
121344700 5274 Embryophyte View MSA
123426720 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.176        
cufflinks 2.979       High
cufflinks 2.398       High
cufflinks 2.699       High
cufflinks 1.576        
cufflinks 1.61        
cufflinks 2.107        
cufflinks 0.973        
cufflinks 1.223        
cufflinks 1.102        
cufflinks 1.045        
cufflinks 1.009        
cufflinks 0.473       Low
cufflinks 0.516       Low
cufflinks 0.935        
cufflinks 1.481        
cufflinks 1.257        
cufflinks 2.548       High
cufflinks 2.373        
cufflinks 1.392        
cufflinks 1.349        
cufflinks 1.433        
cufflinks 0.909        
cufflinks 1.006        
cufflinks 1.664        
cufflinks 2.259        
cufflinks 0.593       Low
cufflinks 1.678        
cufflinks 1.503        
cufflinks 1.347        

0 Strain