Gene : Bradi3g31430 B. distachyon v3.1
Defline:  (1 of 2) PTHR12428//PTHR12428:SF21 - OXA1 Genomic Order:  3774
Name:  ? Bradi3g31430 Secondary Identifier:  ? PAC:32812096
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g31430 0.5kb upstream 0.5kb upstream 6817 true Bd3: 33320307-33327123 Brachypodium distachyon
Bradi3g31430 0.5kb upstream 0.5kb upstream 500 false Bd3: 33320307-33320806 Brachypodium distachyon
Bradi3g31430 0.5kb downstream 0.5kb downstream 6817 true Bd3: 33320807-33327623 Brachypodium distachyon
Bradi3g31430 0.5kb downstream 0.5kb downstream 500 false Bd3: 33327124-33327623 Brachypodium distachyon
Bradi3g31430 1.0kb upstream 1.0kb upstream 7317 true Bd3: 33319807-33327123 Brachypodium distachyon
Bradi3g31430 1.0kb upstream 1.0kb upstream 1000 false Bd3: 33319807-33320806 Brachypodium distachyon
Bradi3g31430 1.0kb downstream 1.0kb downstream 7317 true Bd3: 33320807-33328123 Brachypodium distachyon
Bradi3g31430 1.0kb downstream 1.0kb downstream 1000 false Bd3: 33327124-33328123 Brachypodium distachyon
Bradi3g31430 2.0kb upstream 2.0kb upstream 8317 true Bd3: 33318807-33327123 Brachypodium distachyon
Bradi3g31430 2.0kb upstream 2.0kb upstream 2000 false Bd3: 33318807-33320806 Brachypodium distachyon
Bradi3g31430 2.0kb downstream 2.0kb downstream 8317 true Bd3: 33320807-33329123 Brachypodium distachyon
Bradi3g31430 2.0kb downstream 2.0kb downstream 2000 false Bd3: 33327124-33329123 Brachypodium distachyon
Bradi3g31430 5.0kb upstream 5.0kb upstream 11317 true Bd3: 33315807-33327123 Brachypodium distachyon
Bradi3g31430 5.0kb upstream 5.0kb upstream 5000 false Bd3: 33315807-33320806 Brachypodium distachyon
Bradi3g31430 5.0kb downstream 5.0kb downstream 11317 true Bd3: 33320807-33332123 Brachypodium distachyon
Bradi3g31430 5.0kb downstream 5.0kb downstream 5000 false Bd3: 33327124-33332123 Brachypodium distachyon
Bradi3g31430 10.0kb upstream 10.0kb upstream 16317 true Bd3: 33310807-33327123 Brachypodium distachyon
Bradi3g31430 10.0kb upstream 10.0kb upstream 10000 false Bd3: 33310807-33320806 Brachypodium distachyon
Bradi3g31430 10.0kb downstream 10.0kb downstream 16317 true Bd3: 33320807-33337123 Brachypodium distachyon
Bradi3g31430 10.0kb downstream 10.0kb downstream 10000 false Bd3: 33327124-33337123 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579547 5269 Grass View MSA
122051610 5273 Angiosperm View MSA
121347323 5274 Embryophyte View MSA
123428331 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.531        
cufflinks 0.775        
cufflinks 0.593        
cufflinks 0.723        
cufflinks 0.201       Low
cufflinks 0.622        
cufflinks 0.683        
cufflinks 0.497        
cufflinks 0.606        
cufflinks 0.333        
cufflinks 0.267        
cufflinks 0.411        
cufflinks 0.191       Low
cufflinks 0.271        
cufflinks 0.277        
cufflinks 0.747        
cufflinks 0.756        
cufflinks 1.66       High
cufflinks 0.423        
cufflinks 0.054     Low Low
cufflinks 0.681        
cufflinks 0.52        
cufflinks 0.47        
cufflinks 0.545        
cufflinks 0.543        
cufflinks 0.408        
cufflinks 0.303        
cufflinks 0.387        
cufflinks 0.44        
cufflinks 0.701        

0 Strain