Gene : Bradi3g31425 B. distachyon v3.1
Defline:  (1 of 1) PF04561//PF04563//PF04565 - RNA polymerase Rpb2, domain 2 (RNA_pol_Rpb2_2) // RNA polymerase beta subunit (RNA_pol_Rpb2_1) // RNA polymerase Rpb2, domain 3 (RNA_pol_Rpb2_3) Genomic Order:  3773
Name:  ? Bradi3g31425 Secondary Identifier:  ? PAC:32819412
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g31425 0.5kb upstream 0.5kb upstream 2421 true Bd3: 33294205-33296625 Brachypodium distachyon
Bradi3g31425 0.5kb upstream 0.5kb upstream 500 false Bd3: 33296126-33296625 Brachypodium distachyon
Bradi3g31425 0.5kb downstream 0.5kb downstream 2421 true Bd3: 33293705-33296125 Brachypodium distachyon
Bradi3g31425 0.5kb downstream 0.5kb downstream 500 false Bd3: 33293705-33294204 Brachypodium distachyon
Bradi3g31425 1.0kb upstream 1.0kb upstream 2921 true Bd3: 33294205-33297125 Brachypodium distachyon
Bradi3g31425 1.0kb upstream 1.0kb upstream 1000 false Bd3: 33296126-33297125 Brachypodium distachyon
Bradi3g31425 1.0kb downstream 1.0kb downstream 2921 true Bd3: 33293205-33296125 Brachypodium distachyon
Bradi3g31425 1.0kb downstream 1.0kb downstream 1000 false Bd3: 33293205-33294204 Brachypodium distachyon
Bradi3g31425 2.0kb upstream 2.0kb upstream 3921 true Bd3: 33294205-33298125 Brachypodium distachyon
Bradi3g31425 2.0kb upstream 2.0kb upstream 2000 false Bd3: 33296126-33298125 Brachypodium distachyon
Bradi3g31425 2.0kb downstream 2.0kb downstream 3921 true Bd3: 33292205-33296125 Brachypodium distachyon
Bradi3g31425 2.0kb downstream 2.0kb downstream 2000 false Bd3: 33292205-33294204 Brachypodium distachyon
Bradi3g31425 5.0kb upstream 5.0kb upstream 6921 true Bd3: 33294205-33301125 Brachypodium distachyon
Bradi3g31425 5.0kb upstream 5.0kb upstream 5000 false Bd3: 33296126-33301125 Brachypodium distachyon
Bradi3g31425 5.0kb downstream 5.0kb downstream 6921 true Bd3: 33289205-33296125 Brachypodium distachyon
Bradi3g31425 5.0kb downstream 5.0kb downstream 5000 false Bd3: 33289205-33294204 Brachypodium distachyon
Bradi3g31425 10.0kb upstream 10.0kb upstream 11921 true Bd3: 33294205-33306125 Brachypodium distachyon
Bradi3g31425 10.0kb upstream 10.0kb upstream 10000 false Bd3: 33296126-33306125 Brachypodium distachyon
Bradi3g31425 10.0kb downstream 10.0kb downstream 11921 true Bd3: 33284205-33296125 Brachypodium distachyon
Bradi3g31425 10.0kb downstream 10.0kb downstream 10000 false Bd3: 33284205-33294204 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028490 5273 Angiosperm View MSA
124587497 5269 Grass View MSA
121350091 5274 Embryophyte View MSA
123381575 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain