Gene : Bradi3g32420 B. distachyon v3.1
Defline:  (1 of 2) K08242 - 24-methylenesterol C-methyltransferase (E2.1.1.143) Genomic Order:  3917
Name:  ? Bradi3g32420 Secondary Identifier:  ? PAC:32820720
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-2541 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g32420 0.5kb upstream 0.5kb upstream 2170 true Bd3: 34528849-34531018 Brachypodium distachyon
Bradi3g32420 0.5kb upstream 0.5kb upstream 500 false Bd3: 34530519-34531018 Brachypodium distachyon
Bradi3g32420 0.5kb downstream 0.5kb downstream 2170 true Bd3: 34528349-34530518 Brachypodium distachyon
Bradi3g32420 0.5kb downstream 0.5kb downstream 500 false Bd3: 34528349-34528848 Brachypodium distachyon
Bradi3g32420 1.0kb upstream 1.0kb upstream 2670 true Bd3: 34528849-34531518 Brachypodium distachyon
Bradi3g32420 1.0kb upstream 1.0kb upstream 1000 false Bd3: 34530519-34531518 Brachypodium distachyon
Bradi3g32420 1.0kb downstream 1.0kb downstream 2670 true Bd3: 34527849-34530518 Brachypodium distachyon
Bradi3g32420 1.0kb downstream 1.0kb downstream 1000 false Bd3: 34527849-34528848 Brachypodium distachyon
Bradi3g32420 2.0kb upstream 2.0kb upstream 3670 true Bd3: 34528849-34532518 Brachypodium distachyon
Bradi3g32420 2.0kb upstream 2.0kb upstream 2000 false Bd3: 34530519-34532518 Brachypodium distachyon
Bradi3g32420 2.0kb downstream 2.0kb downstream 3670 true Bd3: 34526849-34530518 Brachypodium distachyon
Bradi3g32420 2.0kb downstream 2.0kb downstream 2000 false Bd3: 34526849-34528848 Brachypodium distachyon
Bradi3g32420 5.0kb upstream 5.0kb upstream 6670 true Bd3: 34528849-34535518 Brachypodium distachyon
Bradi3g32420 5.0kb upstream 5.0kb upstream 5000 false Bd3: 34530519-34535518 Brachypodium distachyon
Bradi3g32420 5.0kb downstream 5.0kb downstream 6670 true Bd3: 34523849-34530518 Brachypodium distachyon
Bradi3g32420 5.0kb downstream 5.0kb downstream 5000 false Bd3: 34523849-34528848 Brachypodium distachyon
Bradi3g32420 10.0kb upstream 10.0kb upstream 11670 true Bd3: 34528849-34540518 Brachypodium distachyon
Bradi3g32420 10.0kb upstream 10.0kb upstream 10000 false Bd3: 34530519-34540518 Brachypodium distachyon
Bradi3g32420 10.0kb downstream 10.0kb downstream 11670 true Bd3: 34518849-34530518 Brachypodium distachyon
Bradi3g32420 10.0kb downstream 10.0kb downstream 10000 false Bd3: 34518849-34528848 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577526 5269 Grass View MSA
122047271 5273 Angiosperm View MSA
121344259 5274 Embryophyte View MSA
123426805 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.63        
cufflinks 4.331        
cufflinks 4.048        
cufflinks 5.498        
cufflinks 0.671        
cufflinks 4.17        
cufflinks 4.951        
cufflinks 4.039        
cufflinks 3.559        
cufflinks 3.564        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.666        
cufflinks 0.034     Low Low
cufflinks 0.024     Low Low
cufflinks 0.772        
cufflinks 4.859        
cufflinks 5.51        
cufflinks 8.02        
cufflinks 3.678        
cufflinks 0.146       Low
cufflinks 5.008        
cufflinks 2.896        
cufflinks 3.534        
cufflinks 3.566        
cufflinks 4.362        
cufflinks 3.799        
cufflinks 0.044     Low Low
cufflinks 4.346        
cufflinks 3.802        
cufflinks 5.067        

0 Strain