Gene : Bradi3g32870 B. distachyon v3.1
Defline:  (1 of 4) PF12043 - Domain of unknown function (DUF3527) (DUF3527) Genomic Order:  3977
Name:  ? Bradi3g32870 Secondary Identifier:  ? PAC:32822426
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g32870 0.5kb upstream 0.5kb upstream 4258 true Bd3: 35003878-35008135 Brachypodium distachyon
Bradi3g32870 0.5kb upstream 0.5kb upstream 500 false Bd3: 35003878-35004377 Brachypodium distachyon
Bradi3g32870 0.5kb downstream 0.5kb downstream 4258 true Bd3: 35004378-35008635 Brachypodium distachyon
Bradi3g32870 0.5kb downstream 0.5kb downstream 500 false Bd3: 35008136-35008635 Brachypodium distachyon
Bradi3g32870 1.0kb upstream 1.0kb upstream 4758 true Bd3: 35003378-35008135 Brachypodium distachyon
Bradi3g32870 1.0kb upstream 1.0kb upstream 1000 false Bd3: 35003378-35004377 Brachypodium distachyon
Bradi3g32870 1.0kb downstream 1.0kb downstream 4758 true Bd3: 35004378-35009135 Brachypodium distachyon
Bradi3g32870 1.0kb downstream 1.0kb downstream 1000 false Bd3: 35008136-35009135 Brachypodium distachyon
Bradi3g32870 2.0kb upstream 2.0kb upstream 5758 true Bd3: 35002378-35008135 Brachypodium distachyon
Bradi3g32870 2.0kb upstream 2.0kb upstream 2000 false Bd3: 35002378-35004377 Brachypodium distachyon
Bradi3g32870 2.0kb downstream 2.0kb downstream 5758 true Bd3: 35004378-35010135 Brachypodium distachyon
Bradi3g32870 2.0kb downstream 2.0kb downstream 2000 false Bd3: 35008136-35010135 Brachypodium distachyon
Bradi3g32870 5.0kb upstream 5.0kb upstream 8758 true Bd3: 34999378-35008135 Brachypodium distachyon
Bradi3g32870 5.0kb upstream 5.0kb upstream 5000 false Bd3: 34999378-35004377 Brachypodium distachyon
Bradi3g32870 5.0kb downstream 5.0kb downstream 8758 true Bd3: 35004378-35013135 Brachypodium distachyon
Bradi3g32870 5.0kb downstream 5.0kb downstream 5000 false Bd3: 35008136-35013135 Brachypodium distachyon
Bradi3g32870 10.0kb upstream 10.0kb upstream 13758 true Bd3: 34994378-35008135 Brachypodium distachyon
Bradi3g32870 10.0kb upstream 10.0kb upstream 10000 false Bd3: 34994378-35004377 Brachypodium distachyon
Bradi3g32870 10.0kb downstream 10.0kb downstream 13758 true Bd3: 35004378-35018135 Brachypodium distachyon
Bradi3g32870 10.0kb downstream 10.0kb downstream 10000 false Bd3: 35008136-35018135 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124581419 5269 Grass View MSA
122047262 5273 Angiosperm View MSA
121310717 5274 Embryophyte View MSA
123348134 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.564        
cufflinks 1.095        
cufflinks 1.021        
cufflinks 0.993        
cufflinks 0.38        
cufflinks 0.95        
cufflinks 0.64        
cufflinks 0.619        
cufflinks 0.879        
cufflinks 0.585        
cufflinks 0.036     Low Low
cufflinks 0.76        
cufflinks 0.01     Low Low
cufflinks 0.038     Low Low
cufflinks 0.205        
cufflinks 1.097        
cufflinks 0.791        
cufflinks 1.608       High
cufflinks 0.318        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.686        
cufflinks 0.945        
cufflinks 0.595        
cufflinks 0.706        
cufflinks 0.929        
cufflinks 0.861        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.69        
cufflinks 0.727        
cufflinks 1.364        

0 Strain