Gene : Bradi3g33090 B. distachyon v3.1
Defline:  (1 of 1) PTHR33317:SF2 - HOLLIDAY JUNCTION RESOLVASE-RELATED Genomic Order:  4003
Name:  ? Bradi3g33090 Secondary Identifier:  ? PAC:32813854
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g33090 0.5kb upstream 0.5kb upstream 2397 true Bd3: 35210255-35212651 Brachypodium distachyon
Bradi3g33090 0.5kb upstream 0.5kb upstream 500 false Bd3: 35212152-35212651 Brachypodium distachyon
Bradi3g33090 0.5kb downstream 0.5kb downstream 2397 true Bd3: 35209755-35212151 Brachypodium distachyon
Bradi3g33090 0.5kb downstream 0.5kb downstream 500 false Bd3: 35209755-35210254 Brachypodium distachyon
Bradi3g33090 1.0kb upstream 1.0kb upstream 2897 true Bd3: 35210255-35213151 Brachypodium distachyon
Bradi3g33090 1.0kb upstream 1.0kb upstream 1000 false Bd3: 35212152-35213151 Brachypodium distachyon
Bradi3g33090 1.0kb downstream 1.0kb downstream 2897 true Bd3: 35209255-35212151 Brachypodium distachyon
Bradi3g33090 1.0kb downstream 1.0kb downstream 1000 false Bd3: 35209255-35210254 Brachypodium distachyon
Bradi3g33090 2.0kb upstream 2.0kb upstream 3897 true Bd3: 35210255-35214151 Brachypodium distachyon
Bradi3g33090 2.0kb upstream 2.0kb upstream 2000 false Bd3: 35212152-35214151 Brachypodium distachyon
Bradi3g33090 2.0kb downstream 2.0kb downstream 3897 true Bd3: 35208255-35212151 Brachypodium distachyon
Bradi3g33090 2.0kb downstream 2.0kb downstream 2000 false Bd3: 35208255-35210254 Brachypodium distachyon
Bradi3g33090 5.0kb upstream 5.0kb upstream 6897 true Bd3: 35210255-35217151 Brachypodium distachyon
Bradi3g33090 5.0kb upstream 5.0kb upstream 5000 false Bd3: 35212152-35217151 Brachypodium distachyon
Bradi3g33090 5.0kb downstream 5.0kb downstream 6897 true Bd3: 35205255-35212151 Brachypodium distachyon
Bradi3g33090 5.0kb downstream 5.0kb downstream 5000 false Bd3: 35205255-35210254 Brachypodium distachyon
Bradi3g33090 10.0kb upstream 10.0kb upstream 11897 true Bd3: 35210255-35222151 Brachypodium distachyon
Bradi3g33090 10.0kb upstream 10.0kb upstream 10000 false Bd3: 35212152-35222151 Brachypodium distachyon
Bradi3g33090 10.0kb downstream 10.0kb downstream 11897 true Bd3: 35200255-35212151 Brachypodium distachyon
Bradi3g33090 10.0kb downstream 10.0kb downstream 10000 false Bd3: 35200255-35210254 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574564 5269 Grass View MSA
122046304 5273 Angiosperm View MSA
121343915 5274 Embryophyte View MSA
123426695 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.936        
cufflinks 10.191     High  
cufflinks 12.113     High  
cufflinks 12.688     High High
cufflinks 4.329       Low
cufflinks 7.345        
cufflinks 8.632        
cufflinks 7.009        
cufflinks 7.034        
cufflinks 12.373     High High
cufflinks 8.058        
cufflinks 6.589        
cufflinks 7.006        
cufflinks 7.63        
cufflinks 6.521        
cufflinks 7.644        
cufflinks 8.228        
cufflinks 2.183       Low
cufflinks 8.446        
cufflinks 4.873       Low
cufflinks 5.049        
cufflinks 9.791        
cufflinks 8.017        
cufflinks 8.764        
cufflinks 9.109        
cufflinks 13.725     High High
cufflinks 6.846        
cufflinks 13.749     High High
cufflinks 11.941     High  
cufflinks 9.274        

0 Strain