Gene : Bradi3g33070 B. distachyon v3.1
Defline:  (1 of 1) PTHR31807:SF10 - QWRF MOTIF-CONTAINING PROTEIN 7 Genomic Order:  4001
Name:  ? Bradi3g33070 Secondary Identifier:  ? PAC:32823622
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g33070 0.5kb upstream 0.5kb upstream 6197 true Bd3: 35194210-35200406 Brachypodium distachyon
Bradi3g33070 0.5kb upstream 0.5kb upstream 500 false Bd3: 35199907-35200406 Brachypodium distachyon
Bradi3g33070 0.5kb downstream 0.5kb downstream 6197 true Bd3: 35193710-35199906 Brachypodium distachyon
Bradi3g33070 0.5kb downstream 0.5kb downstream 500 false Bd3: 35193710-35194209 Brachypodium distachyon
Bradi3g33070 1.0kb upstream 1.0kb upstream 6697 true Bd3: 35194210-35200906 Brachypodium distachyon
Bradi3g33070 1.0kb upstream 1.0kb upstream 1000 false Bd3: 35199907-35200906 Brachypodium distachyon
Bradi3g33070 1.0kb downstream 1.0kb downstream 6697 true Bd3: 35193210-35199906 Brachypodium distachyon
Bradi3g33070 1.0kb downstream 1.0kb downstream 1000 false Bd3: 35193210-35194209 Brachypodium distachyon
Bradi3g33070 2.0kb upstream 2.0kb upstream 7697 true Bd3: 35194210-35201906 Brachypodium distachyon
Bradi3g33070 2.0kb upstream 2.0kb upstream 2000 false Bd3: 35199907-35201906 Brachypodium distachyon
Bradi3g33070 2.0kb downstream 2.0kb downstream 7697 true Bd3: 35192210-35199906 Brachypodium distachyon
Bradi3g33070 2.0kb downstream 2.0kb downstream 2000 false Bd3: 35192210-35194209 Brachypodium distachyon
Bradi3g33070 5.0kb upstream 5.0kb upstream 10697 true Bd3: 35194210-35204906 Brachypodium distachyon
Bradi3g33070 5.0kb upstream 5.0kb upstream 5000 false Bd3: 35199907-35204906 Brachypodium distachyon
Bradi3g33070 5.0kb downstream 5.0kb downstream 10697 true Bd3: 35189210-35199906 Brachypodium distachyon
Bradi3g33070 5.0kb downstream 5.0kb downstream 5000 false Bd3: 35189210-35194209 Brachypodium distachyon
Bradi3g33070 10.0kb upstream 10.0kb upstream 15697 true Bd3: 35194210-35209906 Brachypodium distachyon
Bradi3g33070 10.0kb upstream 10.0kb upstream 10000 false Bd3: 35199907-35209906 Brachypodium distachyon
Bradi3g33070 10.0kb downstream 10.0kb downstream 15697 true Bd3: 35184210-35199906 Brachypodium distachyon
Bradi3g33070 10.0kb downstream 10.0kb downstream 10000 false Bd3: 35184210-35194209 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124579439 5269 Grass View MSA
122044458 5273 Angiosperm View MSA
121348675 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.575        
cufflinks 0.586        
cufflinks 0.695        
cufflinks 0.869        
cufflinks 1.161        
cufflinks 0.789        
cufflinks 0.889        
cufflinks 1.126        
cufflinks 1.138        
cufflinks 0.976        
cufflinks 0.409       Low
cufflinks 0.731        
cufflinks 0.746        
cufflinks 0.44       Low
cufflinks 1.443        
cufflinks 0.691        
cufflinks 1.591        
cufflinks 2.978       High
cufflinks 1.245        
cufflinks 0.31       Low
cufflinks 6.028       High
cufflinks 0.425       Low
cufflinks 1.021        
cufflinks 1.059        
cufflinks 1.116        
cufflinks 0.691        
cufflinks 0.441       Low
cufflinks 0.896        
cufflinks 0.822        
cufflinks 1.772        

0 Strain