Gene : Bradi3g37830 B. distachyon v3.1
Defline:  (1 of 2) PTHR11999:SF113 - GLUTAMATE DECARBOXYLASE 2 Genomic Order:  4653
Name:  ? Bradi3g37830 Secondary Identifier:  ? PAC:32820294
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY0-1305 Brachypodium distachyon pathologic  
Bdistachyon PWY-4321 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g37830 0.5kb upstream 0.5kb upstream 4632 true Bd3: 40123767-40128398 Brachypodium distachyon
Bradi3g37830 0.5kb upstream 0.5kb upstream 500 false Bd3: 40127899-40128398 Brachypodium distachyon
Bradi3g37830 0.5kb downstream 0.5kb downstream 4632 true Bd3: 40123267-40127898 Brachypodium distachyon
Bradi3g37830 0.5kb downstream 0.5kb downstream 500 false Bd3: 40123267-40123766 Brachypodium distachyon
Bradi3g37830 1.0kb upstream 1.0kb upstream 5132 true Bd3: 40123767-40128898 Brachypodium distachyon
Bradi3g37830 1.0kb upstream 1.0kb upstream 1000 false Bd3: 40127899-40128898 Brachypodium distachyon
Bradi3g37830 1.0kb downstream 1.0kb downstream 5132 true Bd3: 40122767-40127898 Brachypodium distachyon
Bradi3g37830 1.0kb downstream 1.0kb downstream 1000 false Bd3: 40122767-40123766 Brachypodium distachyon
Bradi3g37830 2.0kb upstream 2.0kb upstream 6132 true Bd3: 40123767-40129898 Brachypodium distachyon
Bradi3g37830 2.0kb upstream 2.0kb upstream 2000 false Bd3: 40127899-40129898 Brachypodium distachyon
Bradi3g37830 2.0kb downstream 2.0kb downstream 6132 true Bd3: 40121767-40127898 Brachypodium distachyon
Bradi3g37830 2.0kb downstream 2.0kb downstream 2000 false Bd3: 40121767-40123766 Brachypodium distachyon
Bradi3g37830 5.0kb upstream 5.0kb upstream 9132 true Bd3: 40123767-40132898 Brachypodium distachyon
Bradi3g37830 5.0kb upstream 5.0kb upstream 5000 false Bd3: 40127899-40132898 Brachypodium distachyon
Bradi3g37830 5.0kb downstream 5.0kb downstream 9132 true Bd3: 40118767-40127898 Brachypodium distachyon
Bradi3g37830 5.0kb downstream 5.0kb downstream 5000 false Bd3: 40118767-40123766 Brachypodium distachyon
Bradi3g37830 10.0kb upstream 10.0kb upstream 14132 true Bd3: 40123767-40137898 Brachypodium distachyon
Bradi3g37830 10.0kb upstream 10.0kb upstream 10000 false Bd3: 40127899-40137898 Brachypodium distachyon
Bradi3g37830 10.0kb downstream 10.0kb downstream 14132 true Bd3: 40113767-40127898 Brachypodium distachyon
Bradi3g37830 10.0kb downstream 10.0kb downstream 10000 false Bd3: 40113767-40123766 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124581396 5269 Grass View MSA
122050334 5273 Angiosperm View MSA
121350824 5274 Embryophyte View MSA
123427084 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 163.541     High High
cufflinks 19.882     High  
cufflinks 12.473     High  
cufflinks 16.244     High  
cufflinks 55.189     High High
cufflinks 21.584     High  
cufflinks 23.633     High  
cufflinks 19.972     High  
cufflinks 22.904     High  
cufflinks 6.531       Low
cufflinks 23.959     High  
cufflinks 21.932     High  
cufflinks 15.74     High  
cufflinks 12.397     High  
cufflinks 28.888     High  
cufflinks 18.362     High  
cufflinks 17.956     High  
cufflinks 22.743     High  
cufflinks 120.413     High High
cufflinks 65.694     High High
cufflinks 70.813     High High
cufflinks 10.448     High Low
cufflinks 27.383     High  
cufflinks 22.168     High  
cufflinks 22.458     High  
cufflinks 12.259     High  
cufflinks 16.987     High  
cufflinks 16.073     High  
cufflinks 9.431       Low
cufflinks 48.824     High  

0 Strain