Gene : Bradi3g37650 B. distachyon v3.1
Defline:  (1 of 1) PTHR22893:SF67 - 12-OXOPHYTODIENOATE REDUCTASE 3 Genomic Order:  4629
Name:  ? Bradi3g37650 Secondary Identifier:  ? PAC:32813883
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-735 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g37650 0.5kb upstream 0.5kb upstream 5291 true Bd3: 39907411-39912701 Brachypodium distachyon
Bradi3g37650 0.5kb upstream 0.5kb upstream 500 false Bd3: 39912202-39912701 Brachypodium distachyon
Bradi3g37650 0.5kb downstream 0.5kb downstream 5291 true Bd3: 39906911-39912201 Brachypodium distachyon
Bradi3g37650 0.5kb downstream 0.5kb downstream 500 false Bd3: 39906911-39907410 Brachypodium distachyon
Bradi3g37650 1.0kb upstream 1.0kb upstream 5791 true Bd3: 39907411-39913201 Brachypodium distachyon
Bradi3g37650 1.0kb upstream 1.0kb upstream 1000 false Bd3: 39912202-39913201 Brachypodium distachyon
Bradi3g37650 1.0kb downstream 1.0kb downstream 5791 true Bd3: 39906411-39912201 Brachypodium distachyon
Bradi3g37650 1.0kb downstream 1.0kb downstream 1000 false Bd3: 39906411-39907410 Brachypodium distachyon
Bradi3g37650 2.0kb upstream 2.0kb upstream 6791 true Bd3: 39907411-39914201 Brachypodium distachyon
Bradi3g37650 2.0kb upstream 2.0kb upstream 2000 false Bd3: 39912202-39914201 Brachypodium distachyon
Bradi3g37650 2.0kb downstream 2.0kb downstream 6791 true Bd3: 39905411-39912201 Brachypodium distachyon
Bradi3g37650 2.0kb downstream 2.0kb downstream 2000 false Bd3: 39905411-39907410 Brachypodium distachyon
Bradi3g37650 5.0kb upstream 5.0kb upstream 9791 true Bd3: 39907411-39917201 Brachypodium distachyon
Bradi3g37650 5.0kb upstream 5.0kb upstream 5000 false Bd3: 39912202-39917201 Brachypodium distachyon
Bradi3g37650 5.0kb downstream 5.0kb downstream 9791 true Bd3: 39902411-39912201 Brachypodium distachyon
Bradi3g37650 5.0kb downstream 5.0kb downstream 5000 false Bd3: 39902411-39907410 Brachypodium distachyon
Bradi3g37650 10.0kb upstream 10.0kb upstream 14791 true Bd3: 39907411-39922201 Brachypodium distachyon
Bradi3g37650 10.0kb upstream 10.0kb upstream 10000 false Bd3: 39912202-39922201 Brachypodium distachyon
Bradi3g37650 10.0kb downstream 10.0kb downstream 14791 true Bd3: 39897411-39912201 Brachypodium distachyon
Bradi3g37650 10.0kb downstream 10.0kb downstream 10000 false Bd3: 39897411-39907410 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576769 5269 Grass View MSA
122045758 5273 Angiosperm View MSA
121351640 5274 Embryophyte View MSA
123428487 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.275        
cufflinks 9.189        
cufflinks 11.908     High  
cufflinks 10.183        
cufflinks 35.031     High High
cufflinks 8.137        
cufflinks 8.169        
cufflinks 12.139     High  
cufflinks 8.744        
cufflinks 8.074        
cufflinks 6.707       Low
cufflinks 9.383     High  
cufflinks 6.672       Low
cufflinks 5.264       Low
cufflinks 12.032     High  
cufflinks 7.801        
cufflinks 8.72        
cufflinks 9.722        
cufflinks 12.73        
cufflinks 15.679     High High
cufflinks 12.562     High  
cufflinks 9.282        
cufflinks 10.645     High  
cufflinks 8.988        
cufflinks 6.889        
cufflinks 10.99     High  
cufflinks 6.784       Low
cufflinks 11.11     High  
cufflinks 9.577        
cufflinks 14.014     High High

0 Strain