Gene : Bradi3g37950 B. distachyon v3.1
Defline:  (1 of 1) K11547 - kinetochore protein NDC80 (NDC80, HEC1, TID3) Genomic Order:  4667
Name:  ? Bradi3g37950 Secondary Identifier:  ? PAC:32816549
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g37950 0.5kb upstream 0.5kb upstream 8247 true Bd3: 40219447-40227693 Brachypodium distachyon
Bradi3g37950 0.5kb upstream 0.5kb upstream 500 false Bd3: 40219447-40219946 Brachypodium distachyon
Bradi3g37950 0.5kb downstream 0.5kb downstream 8247 true Bd3: 40219947-40228193 Brachypodium distachyon
Bradi3g37950 0.5kb downstream 0.5kb downstream 500 false Bd3: 40227694-40228193 Brachypodium distachyon
Bradi3g37950 1.0kb upstream 1.0kb upstream 8747 true Bd3: 40218947-40227693 Brachypodium distachyon
Bradi3g37950 1.0kb upstream 1.0kb upstream 1000 false Bd3: 40218947-40219946 Brachypodium distachyon
Bradi3g37950 1.0kb downstream 1.0kb downstream 8747 true Bd3: 40219947-40228693 Brachypodium distachyon
Bradi3g37950 1.0kb downstream 1.0kb downstream 1000 false Bd3: 40227694-40228693 Brachypodium distachyon
Bradi3g37950 2.0kb upstream 2.0kb upstream 9747 true Bd3: 40217947-40227693 Brachypodium distachyon
Bradi3g37950 2.0kb upstream 2.0kb upstream 2000 false Bd3: 40217947-40219946 Brachypodium distachyon
Bradi3g37950 2.0kb downstream 2.0kb downstream 9747 true Bd3: 40219947-40229693 Brachypodium distachyon
Bradi3g37950 2.0kb downstream 2.0kb downstream 2000 false Bd3: 40227694-40229693 Brachypodium distachyon
Bradi3g37950 5.0kb upstream 5.0kb upstream 12747 true Bd3: 40214947-40227693 Brachypodium distachyon
Bradi3g37950 5.0kb upstream 5.0kb upstream 5000 false Bd3: 40214947-40219946 Brachypodium distachyon
Bradi3g37950 5.0kb downstream 5.0kb downstream 12747 true Bd3: 40219947-40232693 Brachypodium distachyon
Bradi3g37950 5.0kb downstream 5.0kb downstream 5000 false Bd3: 40227694-40232693 Brachypodium distachyon
Bradi3g37950 10.0kb upstream 10.0kb upstream 17747 true Bd3: 40209947-40227693 Brachypodium distachyon
Bradi3g37950 10.0kb upstream 10.0kb upstream 10000 false Bd3: 40209947-40219946 Brachypodium distachyon
Bradi3g37950 10.0kb downstream 10.0kb downstream 17747 true Bd3: 40219947-40237693 Brachypodium distachyon
Bradi3g37950 10.0kb downstream 10.0kb downstream 10000 false Bd3: 40227694-40237693 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124584363 5269 Grass View MSA
122049067 5273 Angiosperm View MSA
121344778 5274 Embryophyte View MSA
123428580 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.704        
cufflinks 3.353        
cufflinks 3.503        
cufflinks 3.38        
cufflinks 1.465       Low
cufflinks 2.785        
cufflinks 2.982        
cufflinks 2.605        
cufflinks 2.56        
cufflinks 2.495        
cufflinks 2.146        
cufflinks 2.874        
cufflinks 2.087        
cufflinks 2.242        
cufflinks 1.981        
cufflinks 3.391        
cufflinks 2.326        
cufflinks 4.091       High
cufflinks 2.269        
cufflinks 1.398       Low
cufflinks 2.118        
cufflinks 3.036        
cufflinks 2.441        
cufflinks 2.216        
cufflinks 2.569        
cufflinks 3.412        
cufflinks 1.675       Low
cufflinks 2.743        
cufflinks 2.809        
cufflinks 3.428        

0 Strain