Gene : Bradi3g38160 B. distachyon v3.1
Defline:  (1 of 1) K00753 - glycoprotein 3-alpha-L-fucosyltransferase (E2.4.1.214) Genomic Order:  4697
Name:  ? Bradi3g38160 Secondary Identifier:  ? PAC:32819813
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g38160 0.5kb upstream 0.5kb upstream 6935 true Bd3: 40393103-40400037 Brachypodium distachyon
Bradi3g38160 0.5kb upstream 0.5kb upstream 500 false Bd3: 40399538-40400037 Brachypodium distachyon
Bradi3g38160 0.5kb downstream 0.5kb downstream 6935 true Bd3: 40392603-40399537 Brachypodium distachyon
Bradi3g38160 0.5kb downstream 0.5kb downstream 500 false Bd3: 40392603-40393102 Brachypodium distachyon
Bradi3g38160 1.0kb upstream 1.0kb upstream 7435 true Bd3: 40393103-40400537 Brachypodium distachyon
Bradi3g38160 1.0kb upstream 1.0kb upstream 1000 false Bd3: 40399538-40400537 Brachypodium distachyon
Bradi3g38160 1.0kb downstream 1.0kb downstream 7435 true Bd3: 40392103-40399537 Brachypodium distachyon
Bradi3g38160 1.0kb downstream 1.0kb downstream 1000 false Bd3: 40392103-40393102 Brachypodium distachyon
Bradi3g38160 2.0kb upstream 2.0kb upstream 8435 true Bd3: 40393103-40401537 Brachypodium distachyon
Bradi3g38160 2.0kb upstream 2.0kb upstream 2000 false Bd3: 40399538-40401537 Brachypodium distachyon
Bradi3g38160 2.0kb downstream 2.0kb downstream 8435 true Bd3: 40391103-40399537 Brachypodium distachyon
Bradi3g38160 2.0kb downstream 2.0kb downstream 2000 false Bd3: 40391103-40393102 Brachypodium distachyon
Bradi3g38160 5.0kb upstream 5.0kb upstream 11435 true Bd3: 40393103-40404537 Brachypodium distachyon
Bradi3g38160 5.0kb upstream 5.0kb upstream 5000 false Bd3: 40399538-40404537 Brachypodium distachyon
Bradi3g38160 5.0kb downstream 5.0kb downstream 11435 true Bd3: 40388103-40399537 Brachypodium distachyon
Bradi3g38160 5.0kb downstream 5.0kb downstream 5000 false Bd3: 40388103-40393102 Brachypodium distachyon
Bradi3g38160 10.0kb upstream 10.0kb upstream 16435 true Bd3: 40393103-40409537 Brachypodium distachyon
Bradi3g38160 10.0kb upstream 10.0kb upstream 10000 false Bd3: 40399538-40409537 Brachypodium distachyon
Bradi3g38160 10.0kb downstream 10.0kb downstream 16435 true Bd3: 40383103-40399537 Brachypodium distachyon
Bradi3g38160 10.0kb downstream 10.0kb downstream 10000 false Bd3: 40383103-40393102 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575674 5269 Grass View MSA
122045550 5273 Angiosperm View MSA
121349778 5274 Embryophyte View MSA
123427537 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.694       High
cufflinks 1.378       Low
cufflinks 1.518       Low
cufflinks 1.88        
cufflinks 2.636        
cufflinks 1.851        
cufflinks 1.569       Low
cufflinks 2.884        
cufflinks 2.722        
cufflinks 3.381       High
cufflinks 3.117        
cufflinks 2.373        
cufflinks 2.415        
cufflinks 2.785        
cufflinks 3.954       High
cufflinks 1.944        
cufflinks 2.751        
cufflinks 4.725       High
cufflinks 1.277       Low
cufflinks 2.031        
cufflinks 2.476        
cufflinks 3.321        
cufflinks 3.081        
cufflinks 2.968        
cufflinks 2.078        
cufflinks 1.875        
cufflinks 2.81        
cufflinks 1.831        
cufflinks 2.468        
cufflinks 2.199        

0 Strain