Gene : Bradi3g38682 B. distachyon v3.1
Defline:  (1 of 1) PTHR31307:SF17 - GENOMIC DNA, CHROMOSOME 3, TAC CLONE:K7P8 Genomic Order:  4766
Name:  ? Bradi3g38682 Secondary Identifier:  ? PAC:32812551
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g38682 0.5kb upstream 0.5kb upstream 2804 true Bd3: 40916991-40919794 Brachypodium distachyon
Bradi3g38682 0.5kb upstream 0.5kb upstream 500 false Bd3: 40916991-40917490 Brachypodium distachyon
Bradi3g38682 0.5kb downstream 0.5kb downstream 2804 true Bd3: 40917491-40920294 Brachypodium distachyon
Bradi3g38682 0.5kb downstream 0.5kb downstream 500 false Bd3: 40919795-40920294 Brachypodium distachyon
Bradi3g38682 1.0kb upstream 1.0kb upstream 3304 true Bd3: 40916491-40919794 Brachypodium distachyon
Bradi3g38682 1.0kb upstream 1.0kb upstream 1000 false Bd3: 40916491-40917490 Brachypodium distachyon
Bradi3g38682 1.0kb downstream 1.0kb downstream 3304 true Bd3: 40917491-40920794 Brachypodium distachyon
Bradi3g38682 1.0kb downstream 1.0kb downstream 1000 false Bd3: 40919795-40920794 Brachypodium distachyon
Bradi3g38682 2.0kb upstream 2.0kb upstream 4304 true Bd3: 40915491-40919794 Brachypodium distachyon
Bradi3g38682 2.0kb upstream 2.0kb upstream 2000 false Bd3: 40915491-40917490 Brachypodium distachyon
Bradi3g38682 2.0kb downstream 2.0kb downstream 4304 true Bd3: 40917491-40921794 Brachypodium distachyon
Bradi3g38682 2.0kb downstream 2.0kb downstream 2000 false Bd3: 40919795-40921794 Brachypodium distachyon
Bradi3g38682 5.0kb upstream 5.0kb upstream 7304 true Bd3: 40912491-40919794 Brachypodium distachyon
Bradi3g38682 5.0kb upstream 5.0kb upstream 5000 false Bd3: 40912491-40917490 Brachypodium distachyon
Bradi3g38682 5.0kb downstream 5.0kb downstream 7304 true Bd3: 40917491-40924794 Brachypodium distachyon
Bradi3g38682 5.0kb downstream 5.0kb downstream 5000 false Bd3: 40919795-40924794 Brachypodium distachyon
Bradi3g38682 10.0kb upstream 10.0kb upstream 12304 true Bd3: 40907491-40919794 Brachypodium distachyon
Bradi3g38682 10.0kb upstream 10.0kb upstream 10000 false Bd3: 40907491-40917490 Brachypodium distachyon
Bradi3g38682 10.0kb downstream 10.0kb downstream 12304 true Bd3: 40917491-40929794 Brachypodium distachyon
Bradi3g38682 10.0kb downstream 10.0kb downstream 10000 false Bd3: 40919795-40929794 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573144 5269 Grass View MSA
122048588 5273 Angiosperm View MSA
121351505 5274 Embryophyte View MSA
123382195 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.119        
cufflinks 3.713        
cufflinks 5.805        
cufflinks 6.749        
cufflinks 11.37     High High
cufflinks 3.255        
cufflinks 4.236        
cufflinks 3.337        
cufflinks 3.434        
cufflinks 8.51        
cufflinks 4.244        
cufflinks 2.186       Low
cufflinks 2.732       Low
cufflinks 4.617        
cufflinks 1.76       Low
cufflinks 3.393        
cufflinks 6.088        
cufflinks 3.064        
cufflinks 13.227     High High
cufflinks 16.936     High High
cufflinks 5.653        
cufflinks 4.345        
cufflinks 4.817        
cufflinks 3.933        
cufflinks 4.11        
cufflinks 6.248        
cufflinks 3.602        
cufflinks 10.068       High
cufflinks 10.296       High
cufflinks 4.133        

0 Strain