Gene : Bradi3g39100 B. distachyon v3.1
Defline:  (1 of 1) PTHR10774//PTHR10774:SF97 - EXTENDED SYNAPTOTAGMIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  4812
Name:  ? Bradi3g39100 Secondary Identifier:  ? PAC:32814944
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g39100 0.5kb upstream 0.5kb upstream 7588 true Bd3: 41244951-41252538 Brachypodium distachyon
Bradi3g39100 0.5kb upstream 0.5kb upstream 500 false Bd3: 41244951-41245450 Brachypodium distachyon
Bradi3g39100 0.5kb downstream 0.5kb downstream 7588 true Bd3: 41245451-41253038 Brachypodium distachyon
Bradi3g39100 0.5kb downstream 0.5kb downstream 500 false Bd3: 41252539-41253038 Brachypodium distachyon
Bradi3g39100 1.0kb upstream 1.0kb upstream 8088 true Bd3: 41244451-41252538 Brachypodium distachyon
Bradi3g39100 1.0kb upstream 1.0kb upstream 1000 false Bd3: 41244451-41245450 Brachypodium distachyon
Bradi3g39100 1.0kb downstream 1.0kb downstream 8088 true Bd3: 41245451-41253538 Brachypodium distachyon
Bradi3g39100 1.0kb downstream 1.0kb downstream 1000 false Bd3: 41252539-41253538 Brachypodium distachyon
Bradi3g39100 2.0kb upstream 2.0kb upstream 9088 true Bd3: 41243451-41252538 Brachypodium distachyon
Bradi3g39100 2.0kb upstream 2.0kb upstream 2000 false Bd3: 41243451-41245450 Brachypodium distachyon
Bradi3g39100 2.0kb downstream 2.0kb downstream 9088 true Bd3: 41245451-41254538 Brachypodium distachyon
Bradi3g39100 2.0kb downstream 2.0kb downstream 2000 false Bd3: 41252539-41254538 Brachypodium distachyon
Bradi3g39100 5.0kb upstream 5.0kb upstream 12088 true Bd3: 41240451-41252538 Brachypodium distachyon
Bradi3g39100 5.0kb upstream 5.0kb upstream 5000 false Bd3: 41240451-41245450 Brachypodium distachyon
Bradi3g39100 5.0kb downstream 5.0kb downstream 12088 true Bd3: 41245451-41257538 Brachypodium distachyon
Bradi3g39100 5.0kb downstream 5.0kb downstream 5000 false Bd3: 41252539-41257538 Brachypodium distachyon
Bradi3g39100 10.0kb upstream 10.0kb upstream 17088 true Bd3: 41235451-41252538 Brachypodium distachyon
Bradi3g39100 10.0kb upstream 10.0kb upstream 10000 false Bd3: 41235451-41245450 Brachypodium distachyon
Bradi3g39100 10.0kb downstream 10.0kb downstream 17088 true Bd3: 41245451-41262538 Brachypodium distachyon
Bradi3g39100 10.0kb downstream 10.0kb downstream 10000 false Bd3: 41252539-41262538 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575327 5269 Grass View MSA
122044186 5273 Angiosperm View MSA
121350183 5274 Embryophyte View MSA
123381609 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.496        
cufflinks 1.829        
cufflinks 2.167        
cufflinks 1.421        
cufflinks 2.067        
cufflinks 1.924        
cufflinks 1.859        
cufflinks 1.371        
cufflinks 1.971        
cufflinks 1.129       Low
cufflinks 2.666        
cufflinks 2.972        
cufflinks 2.707        
cufflinks 1.374        
cufflinks 1.576        
cufflinks 2.064        
cufflinks 1.169        
cufflinks 8.201       High
cufflinks 2.418        
cufflinks 1.293        
cufflinks 1.77        
cufflinks 2.161        
cufflinks 1.487        
cufflinks 1.778        
cufflinks 1.434        
cufflinks 1.905        
cufflinks 2.167        
cufflinks 1.546        
cufflinks 1.532        
cufflinks 3.199       High

0 Strain