Gene : Bradi3g39220 B. distachyon v3.1
Defline:  (1 of 1) PTHR31268//PTHR31268:SF4 - FAMILY NOT NAMED // GALACTINOL--SUCROSE GALACTOSYLTRANSFERASE 1-RELATED Genomic Order:  4826
Name:  ? Bradi3g39220 Secondary Identifier:  ? PAC:32822452
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g39220 0.5kb upstream 0.5kb upstream 4956 true Bd3: 41325120-41330075 Brachypodium distachyon
Bradi3g39220 0.5kb upstream 0.5kb upstream 500 false Bd3: 41325120-41325619 Brachypodium distachyon
Bradi3g39220 0.5kb downstream 0.5kb downstream 4956 true Bd3: 41325620-41330575 Brachypodium distachyon
Bradi3g39220 0.5kb downstream 0.5kb downstream 500 false Bd3: 41330076-41330575 Brachypodium distachyon
Bradi3g39220 1.0kb upstream 1.0kb upstream 5456 true Bd3: 41324620-41330075 Brachypodium distachyon
Bradi3g39220 1.0kb upstream 1.0kb upstream 1000 false Bd3: 41324620-41325619 Brachypodium distachyon
Bradi3g39220 1.0kb downstream 1.0kb downstream 5456 true Bd3: 41325620-41331075 Brachypodium distachyon
Bradi3g39220 1.0kb downstream 1.0kb downstream 1000 false Bd3: 41330076-41331075 Brachypodium distachyon
Bradi3g39220 2.0kb upstream 2.0kb upstream 6456 true Bd3: 41323620-41330075 Brachypodium distachyon
Bradi3g39220 2.0kb upstream 2.0kb upstream 2000 false Bd3: 41323620-41325619 Brachypodium distachyon
Bradi3g39220 2.0kb downstream 2.0kb downstream 6456 true Bd3: 41325620-41332075 Brachypodium distachyon
Bradi3g39220 2.0kb downstream 2.0kb downstream 2000 false Bd3: 41330076-41332075 Brachypodium distachyon
Bradi3g39220 5.0kb upstream 5.0kb upstream 9456 true Bd3: 41320620-41330075 Brachypodium distachyon
Bradi3g39220 5.0kb upstream 5.0kb upstream 5000 false Bd3: 41320620-41325619 Brachypodium distachyon
Bradi3g39220 5.0kb downstream 5.0kb downstream 9456 true Bd3: 41325620-41335075 Brachypodium distachyon
Bradi3g39220 5.0kb downstream 5.0kb downstream 5000 false Bd3: 41330076-41335075 Brachypodium distachyon
Bradi3g39220 10.0kb upstream 10.0kb upstream 14456 true Bd3: 41315620-41330075 Brachypodium distachyon
Bradi3g39220 10.0kb upstream 10.0kb upstream 10000 false Bd3: 41315620-41325619 Brachypodium distachyon
Bradi3g39220 10.0kb downstream 10.0kb downstream 14456 true Bd3: 41325620-41340075 Brachypodium distachyon
Bradi3g39220 10.0kb downstream 10.0kb downstream 10000 false Bd3: 41330076-41340075 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577676 5269 Grass View MSA
122044208 5273 Angiosperm View MSA
123429020 5275 Viridiplantae View MSA
121345613 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.711        
cufflinks 1.52        
cufflinks 2.242       High
cufflinks 1.879        
cufflinks 1.481        
cufflinks 1.365        
cufflinks 1.351        
cufflinks 1.585        
cufflinks 1.25        
cufflinks 1.516        
cufflinks 0.028     Low Low
cufflinks 0.783        
cufflinks 0.181       Low
cufflinks 0.063     Low Low
cufflinks 0.436        
cufflinks 1.326        
cufflinks 0.943        
cufflinks 0.569        
cufflinks 0.94        
cufflinks 0.291        
cufflinks 0.297        
cufflinks 1.598        
cufflinks 1.146        
cufflinks 0.968        
cufflinks 1.127        
cufflinks 2.36       High
cufflinks 0.109       Low
cufflinks 2.292       High
cufflinks 1.755        
cufflinks 0.883        

0 Strain