Gene : Bradi3g39160 B. distachyon v3.1
Defline:  (1 of 1) K11374 - elongator complex protein 2 (ELP2) Genomic Order:  4819
Name:  ? Bradi3g39160 Secondary Identifier:  ? PAC:32823249
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g39160 0.5kb upstream 0.5kb upstream 5237 true Bd3: 41293596-41298832 Brachypodium distachyon
Bradi3g39160 0.5kb upstream 0.5kb upstream 500 false Bd3: 41293596-41294095 Brachypodium distachyon
Bradi3g39160 0.5kb downstream 0.5kb downstream 5237 true Bd3: 41294096-41299332 Brachypodium distachyon
Bradi3g39160 0.5kb downstream 0.5kb downstream 500 false Bd3: 41298833-41299332 Brachypodium distachyon
Bradi3g39160 1.0kb upstream 1.0kb upstream 5737 true Bd3: 41293096-41298832 Brachypodium distachyon
Bradi3g39160 1.0kb upstream 1.0kb upstream 1000 false Bd3: 41293096-41294095 Brachypodium distachyon
Bradi3g39160 1.0kb downstream 1.0kb downstream 5737 true Bd3: 41294096-41299832 Brachypodium distachyon
Bradi3g39160 1.0kb downstream 1.0kb downstream 1000 false Bd3: 41298833-41299832 Brachypodium distachyon
Bradi3g39160 2.0kb upstream 2.0kb upstream 6737 true Bd3: 41292096-41298832 Brachypodium distachyon
Bradi3g39160 2.0kb upstream 2.0kb upstream 2000 false Bd3: 41292096-41294095 Brachypodium distachyon
Bradi3g39160 2.0kb downstream 2.0kb downstream 6737 true Bd3: 41294096-41300832 Brachypodium distachyon
Bradi3g39160 2.0kb downstream 2.0kb downstream 2000 false Bd3: 41298833-41300832 Brachypodium distachyon
Bradi3g39160 5.0kb upstream 5.0kb upstream 9737 true Bd3: 41289096-41298832 Brachypodium distachyon
Bradi3g39160 5.0kb upstream 5.0kb upstream 5000 false Bd3: 41289096-41294095 Brachypodium distachyon
Bradi3g39160 5.0kb downstream 5.0kb downstream 9737 true Bd3: 41294096-41303832 Brachypodium distachyon
Bradi3g39160 5.0kb downstream 5.0kb downstream 5000 false Bd3: 41298833-41303832 Brachypodium distachyon
Bradi3g39160 10.0kb upstream 10.0kb upstream 14737 true Bd3: 41284096-41298832 Brachypodium distachyon
Bradi3g39160 10.0kb upstream 10.0kb upstream 10000 false Bd3: 41284096-41294095 Brachypodium distachyon
Bradi3g39160 10.0kb downstream 10.0kb downstream 14737 true Bd3: 41294096-41308832 Brachypodium distachyon
Bradi3g39160 10.0kb downstream 10.0kb downstream 10000 false Bd3: 41298833-41308832 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573505 5269 Grass View MSA
122046472 5273 Angiosperm View MSA
121347119 5274 Embryophyte View MSA
123427316 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.689        
cufflinks 3.673        
cufflinks 3.319        
cufflinks 3.217        
cufflinks 0.667       Low
cufflinks 3.25        
cufflinks 2.914        
cufflinks 2.524        
cufflinks 3.045        
cufflinks 1.703        
cufflinks 1.437        
cufflinks 2.624        
cufflinks 0.972       Low
cufflinks 1.308        
cufflinks 1.449        
cufflinks 2.923        
cufflinks 2.013        
cufflinks 5.138       High
cufflinks 1.784        
cufflinks 0.19       Low
cufflinks 2.356        
cufflinks 2.256        
cufflinks 2.353        
cufflinks 2.488        
cufflinks 3.015        
cufflinks 2.871        
cufflinks 1.677        
cufflinks 2.213        
cufflinks 2.114        
cufflinks 3.651        

0 Strain