Gene : Bradi3g39480 B. distachyon v3.1
Defline:  (1 of 1) PTHR10766:SF44 - ENDOMEMBRANE FAMILY PROTEIN 70 Genomic Order:  4855
Name:  ? Bradi3g39480 Secondary Identifier:  ? PAC:32823756
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g39480 0.5kb upstream 0.5kb upstream 3769 true Bd3: 41500270-41504038 Brachypodium distachyon
Bradi3g39480 0.5kb upstream 0.5kb upstream 500 false Bd3: 41500270-41500769 Brachypodium distachyon
Bradi3g39480 0.5kb downstream 0.5kb downstream 3769 true Bd3: 41500770-41504538 Brachypodium distachyon
Bradi3g39480 0.5kb downstream 0.5kb downstream 500 false Bd3: 41504039-41504538 Brachypodium distachyon
Bradi3g39480 1.0kb upstream 1.0kb upstream 4269 true Bd3: 41499770-41504038 Brachypodium distachyon
Bradi3g39480 1.0kb upstream 1.0kb upstream 1000 false Bd3: 41499770-41500769 Brachypodium distachyon
Bradi3g39480 1.0kb downstream 1.0kb downstream 4269 true Bd3: 41500770-41505038 Brachypodium distachyon
Bradi3g39480 1.0kb downstream 1.0kb downstream 1000 false Bd3: 41504039-41505038 Brachypodium distachyon
Bradi3g39480 2.0kb upstream 2.0kb upstream 5269 true Bd3: 41498770-41504038 Brachypodium distachyon
Bradi3g39480 2.0kb upstream 2.0kb upstream 2000 false Bd3: 41498770-41500769 Brachypodium distachyon
Bradi3g39480 2.0kb downstream 2.0kb downstream 5269 true Bd3: 41500770-41506038 Brachypodium distachyon
Bradi3g39480 2.0kb downstream 2.0kb downstream 2000 false Bd3: 41504039-41506038 Brachypodium distachyon
Bradi3g39480 5.0kb upstream 5.0kb upstream 8269 true Bd3: 41495770-41504038 Brachypodium distachyon
Bradi3g39480 5.0kb upstream 5.0kb upstream 5000 false Bd3: 41495770-41500769 Brachypodium distachyon
Bradi3g39480 5.0kb downstream 5.0kb downstream 8269 true Bd3: 41500770-41509038 Brachypodium distachyon
Bradi3g39480 5.0kb downstream 5.0kb downstream 5000 false Bd3: 41504039-41509038 Brachypodium distachyon
Bradi3g39480 10.0kb upstream 10.0kb upstream 13269 true Bd3: 41490770-41504038 Brachypodium distachyon
Bradi3g39480 10.0kb upstream 10.0kb upstream 10000 false Bd3: 41490770-41500769 Brachypodium distachyon
Bradi3g39480 10.0kb downstream 10.0kb downstream 13269 true Bd3: 41500770-41514038 Brachypodium distachyon
Bradi3g39480 10.0kb downstream 10.0kb downstream 10000 false Bd3: 41504039-41514038 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574936 5269 Grass View MSA
122044185 5273 Angiosperm View MSA
121349188 5274 Embryophyte View MSA
123426870 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.886     High  
cufflinks 22.583     High  
cufflinks 20.878     High  
cufflinks 19.159     High  
cufflinks 4.398       Low
cufflinks 18.428     High  
cufflinks 18.842     High  
cufflinks 15.424     High  
cufflinks 15.401     High  
cufflinks 11.975     High  
cufflinks 8.134        
cufflinks 18.739     High  
cufflinks 7.161        
cufflinks 6.966        
cufflinks 7.315        
cufflinks 19.707     High  
cufflinks 11.499     High  
cufflinks 27.825     High High
cufflinks 12.925     High  
cufflinks 1.459       Low
cufflinks 23.208     High  
cufflinks 17.2     High  
cufflinks 14.815     High  
cufflinks 15.441     High  
cufflinks 16.304     High  
cufflinks 20.162     High  
cufflinks 8.311        
cufflinks 16.637     High  
cufflinks 16.886     High  
cufflinks 30.59     High High

0 Strain