Gene : Bradi3g39920 B. distachyon v3.1
Defline:  (1 of 1) 2.1.1.207 - tRNA (cytidine(34)-2'-O)-methyltransferase / tRNA methyltransferase L Genomic Order:  4911
Name:  ? Bradi3g39920 Secondary Identifier:  ? PAC:32814102
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g39920 0.5kb upstream 0.5kb upstream 3068 true Bd3: 41897699-41900766 Brachypodium distachyon
Bradi3g39920 0.5kb upstream 0.5kb upstream 500 false Bd3: 41900267-41900766 Brachypodium distachyon
Bradi3g39920 0.5kb downstream 0.5kb downstream 3068 true Bd3: 41897199-41900266 Brachypodium distachyon
Bradi3g39920 0.5kb downstream 0.5kb downstream 500 false Bd3: 41897199-41897698 Brachypodium distachyon
Bradi3g39920 1.0kb upstream 1.0kb upstream 3568 true Bd3: 41897699-41901266 Brachypodium distachyon
Bradi3g39920 1.0kb upstream 1.0kb upstream 1000 false Bd3: 41900267-41901266 Brachypodium distachyon
Bradi3g39920 1.0kb downstream 1.0kb downstream 3568 true Bd3: 41896699-41900266 Brachypodium distachyon
Bradi3g39920 1.0kb downstream 1.0kb downstream 1000 false Bd3: 41896699-41897698 Brachypodium distachyon
Bradi3g39920 2.0kb upstream 2.0kb upstream 4568 true Bd3: 41897699-41902266 Brachypodium distachyon
Bradi3g39920 2.0kb upstream 2.0kb upstream 2000 false Bd3: 41900267-41902266 Brachypodium distachyon
Bradi3g39920 2.0kb downstream 2.0kb downstream 4568 true Bd3: 41895699-41900266 Brachypodium distachyon
Bradi3g39920 2.0kb downstream 2.0kb downstream 2000 false Bd3: 41895699-41897698 Brachypodium distachyon
Bradi3g39920 5.0kb upstream 5.0kb upstream 7568 true Bd3: 41897699-41905266 Brachypodium distachyon
Bradi3g39920 5.0kb upstream 5.0kb upstream 5000 false Bd3: 41900267-41905266 Brachypodium distachyon
Bradi3g39920 5.0kb downstream 5.0kb downstream 7568 true Bd3: 41892699-41900266 Brachypodium distachyon
Bradi3g39920 5.0kb downstream 5.0kb downstream 5000 false Bd3: 41892699-41897698 Brachypodium distachyon
Bradi3g39920 10.0kb upstream 10.0kb upstream 12568 true Bd3: 41897699-41910266 Brachypodium distachyon
Bradi3g39920 10.0kb upstream 10.0kb upstream 10000 false Bd3: 41900267-41910266 Brachypodium distachyon
Bradi3g39920 10.0kb downstream 10.0kb downstream 12568 true Bd3: 41887699-41900266 Brachypodium distachyon
Bradi3g39920 10.0kb downstream 10.0kb downstream 10000 false Bd3: 41887699-41897698 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124585629 5269 Grass View MSA
122045816 5273 Angiosperm View MSA
121345539 5274 Embryophyte View MSA
123426334 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.2     High  
cufflinks 10.301     High  
cufflinks 10.714     High  
cufflinks 14.096     High  
cufflinks 6.549        
cufflinks 8.727        
cufflinks 9.573     High  
cufflinks 8.278        
cufflinks 7.532        
cufflinks 19.784     High High
cufflinks 6.606        
cufflinks 6.909        
cufflinks 4.313        
cufflinks 5.722        
cufflinks 6.46        
cufflinks 8.521        
cufflinks 11.504     High  
cufflinks 2.054       Low
cufflinks 8.933        
cufflinks 2.824       Low
cufflinks 6.703        
cufflinks 10.307     High  
cufflinks 7.098        
cufflinks 7.096        
cufflinks 11.251     High  
cufflinks 16.423     High High
cufflinks 1.913       Low
cufflinks 15.344     High High
cufflinks 14.994     High High
cufflinks 7.204        

0 Strain