Gene : Bradi3g39750 B. distachyon v3.1
Defline:  (1 of 1) 2.6.1.44//2.6.1.45//2.6.1.51 - Alanine--glyoxylate transaminase / Alanine--glyoxylate aminotransferase // Serine--glyoxylate transaminase / SGAT // Serine--pyruvate transaminase / Serine--pyruvate aminotransferase Genomic Order:  4891
Name:  ? Bradi3g39750 Secondary Identifier:  ? PAC:32812827
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon GLYSYN-ALA-PWY Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g39750 0.5kb upstream 0.5kb upstream 3849 true Bd3: 41732784-41736632 Brachypodium distachyon
Bradi3g39750 0.5kb upstream 0.5kb upstream 500 false Bd3: 41736133-41736632 Brachypodium distachyon
Bradi3g39750 0.5kb downstream 0.5kb downstream 3849 true Bd3: 41732284-41736132 Brachypodium distachyon
Bradi3g39750 0.5kb downstream 0.5kb downstream 500 false Bd3: 41732284-41732783 Brachypodium distachyon
Bradi3g39750 1.0kb upstream 1.0kb upstream 4349 true Bd3: 41732784-41737132 Brachypodium distachyon
Bradi3g39750 1.0kb upstream 1.0kb upstream 1000 false Bd3: 41736133-41737132 Brachypodium distachyon
Bradi3g39750 1.0kb downstream 1.0kb downstream 4349 true Bd3: 41731784-41736132 Brachypodium distachyon
Bradi3g39750 1.0kb downstream 1.0kb downstream 1000 false Bd3: 41731784-41732783 Brachypodium distachyon
Bradi3g39750 2.0kb upstream 2.0kb upstream 5349 true Bd3: 41732784-41738132 Brachypodium distachyon
Bradi3g39750 2.0kb upstream 2.0kb upstream 2000 false Bd3: 41736133-41738132 Brachypodium distachyon
Bradi3g39750 2.0kb downstream 2.0kb downstream 5349 true Bd3: 41730784-41736132 Brachypodium distachyon
Bradi3g39750 2.0kb downstream 2.0kb downstream 2000 false Bd3: 41730784-41732783 Brachypodium distachyon
Bradi3g39750 5.0kb upstream 5.0kb upstream 8349 true Bd3: 41732784-41741132 Brachypodium distachyon
Bradi3g39750 5.0kb upstream 5.0kb upstream 5000 false Bd3: 41736133-41741132 Brachypodium distachyon
Bradi3g39750 5.0kb downstream 5.0kb downstream 8349 true Bd3: 41727784-41736132 Brachypodium distachyon
Bradi3g39750 5.0kb downstream 5.0kb downstream 5000 false Bd3: 41727784-41732783 Brachypodium distachyon
Bradi3g39750 10.0kb upstream 10.0kb upstream 13349 true Bd3: 41732784-41746132 Brachypodium distachyon
Bradi3g39750 10.0kb upstream 10.0kb upstream 10000 false Bd3: 41736133-41746132 Brachypodium distachyon
Bradi3g39750 10.0kb downstream 10.0kb downstream 13349 true Bd3: 41722784-41736132 Brachypodium distachyon
Bradi3g39750 10.0kb downstream 10.0kb downstream 10000 false Bd3: 41722784-41732783 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124575339 5269 Grass View MSA
122044965 5273 Angiosperm View MSA
121345609 5274 Embryophyte View MSA
123427199 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 334.024     High  
cufflinks 555.44     High  
cufflinks 671.177     High  
cufflinks 654.665     High  
cufflinks 243.231     High  
cufflinks 407.52     High  
cufflinks 524.356     High  
cufflinks 461.492     High  
cufflinks 410.272     High  
cufflinks 625.401     High  
cufflinks 532.682     High  
cufflinks 306.523     High  
cufflinks 512.246     High  
cufflinks 603.272     High  
cufflinks 373.858     High  
cufflinks 331.685     High  
cufflinks 370.02     High  
cufflinks 5.821       Low
cufflinks 359.817     High  
cufflinks 229.458     High  
cufflinks 147.414     High  
cufflinks 478.372     High  
cufflinks 471.606     High  
cufflinks 366.828     High  
cufflinks 441.563     High  
cufflinks 697.815     High  
cufflinks 741.741     High  
cufflinks 854.993     High  
cufflinks 686.004     High  
cufflinks 108.736     High Low

0 Strain