Gene : Bradi3g35100 B. distachyon v3.1
Defline:  (1 of 12) K07904 - Ras-related protein Rab-11A (RAB11A) Genomic Order:  4282
Name:  ? Bradi3g35100 Secondary Identifier:  ? PAC:32821532
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g35100 0.5kb upstream 0.5kb upstream 3115 true Bd3: 37189981-37193095 Brachypodium distachyon
Bradi3g35100 0.5kb upstream 0.5kb upstream 500 false Bd3: 37189981-37190480 Brachypodium distachyon
Bradi3g35100 0.5kb downstream 0.5kb downstream 3115 true Bd3: 37190481-37193595 Brachypodium distachyon
Bradi3g35100 0.5kb downstream 0.5kb downstream 500 false Bd3: 37193096-37193595 Brachypodium distachyon
Bradi3g35100 1.0kb upstream 1.0kb upstream 3615 true Bd3: 37189481-37193095 Brachypodium distachyon
Bradi3g35100 1.0kb upstream 1.0kb upstream 1000 false Bd3: 37189481-37190480 Brachypodium distachyon
Bradi3g35100 1.0kb downstream 1.0kb downstream 3615 true Bd3: 37190481-37194095 Brachypodium distachyon
Bradi3g35100 1.0kb downstream 1.0kb downstream 1000 false Bd3: 37193096-37194095 Brachypodium distachyon
Bradi3g35100 2.0kb upstream 2.0kb upstream 4615 true Bd3: 37188481-37193095 Brachypodium distachyon
Bradi3g35100 2.0kb upstream 2.0kb upstream 2000 false Bd3: 37188481-37190480 Brachypodium distachyon
Bradi3g35100 2.0kb downstream 2.0kb downstream 4615 true Bd3: 37190481-37195095 Brachypodium distachyon
Bradi3g35100 2.0kb downstream 2.0kb downstream 2000 false Bd3: 37193096-37195095 Brachypodium distachyon
Bradi3g35100 5.0kb upstream 5.0kb upstream 7615 true Bd3: 37185481-37193095 Brachypodium distachyon
Bradi3g35100 5.0kb upstream 5.0kb upstream 5000 false Bd3: 37185481-37190480 Brachypodium distachyon
Bradi3g35100 5.0kb downstream 5.0kb downstream 7615 true Bd3: 37190481-37198095 Brachypodium distachyon
Bradi3g35100 5.0kb downstream 5.0kb downstream 5000 false Bd3: 37193096-37198095 Brachypodium distachyon
Bradi3g35100 10.0kb upstream 10.0kb upstream 12615 true Bd3: 37180481-37193095 Brachypodium distachyon
Bradi3g35100 10.0kb upstream 10.0kb upstream 10000 false Bd3: 37180481-37190480 Brachypodium distachyon
Bradi3g35100 10.0kb downstream 10.0kb downstream 12615 true Bd3: 37190481-37203095 Brachypodium distachyon
Bradi3g35100 10.0kb downstream 10.0kb downstream 10000 false Bd3: 37193096-37203095 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124587924 5269 Grass View MSA
122042184 5273 Angiosperm View MSA
121351595 5274 Embryophyte View MSA
123426852 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.497       High
cufflinks 0.208        
cufflinks 0.159        
cufflinks 0.22        
cufflinks 0.366       High
cufflinks 0.21        
cufflinks 0.198        
cufflinks 0.204        
cufflinks 0.159        
cufflinks 0.215        
cufflinks 0.135        
cufflinks 0.137        
cufflinks 0.142        
cufflinks 0.243        
cufflinks 0.41       High
cufflinks 0.17        
cufflinks 0.17        
cufflinks 0.064     Low Low
cufflinks 0.217        
cufflinks 0.885       High
cufflinks 0.076     Low Low
cufflinks 0.195        
cufflinks 0.156        
cufflinks 0.285        
cufflinks 0.235        
cufflinks 0.184        
cufflinks 0.153        
cufflinks 0.195        
cufflinks 0.199        
cufflinks 0.109     Low Low

0 Strain