Gene : Bradi3g35080 B. distachyon v3.1
Defline:  (1 of 1) PTHR10627//PTHR10627:SF43 - SCP160 Genomic Order:  4281
Name:  ? Bradi3g35080 Secondary Identifier:  ? PAC:32813170
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g35080 0.5kb upstream 0.5kb upstream 3353 true Bd3: 37180726-37184078 Brachypodium distachyon
Bradi3g35080 0.5kb upstream 0.5kb upstream 500 false Bd3: 37180726-37181225 Brachypodium distachyon
Bradi3g35080 0.5kb downstream 0.5kb downstream 3353 true Bd3: 37181226-37184578 Brachypodium distachyon
Bradi3g35080 0.5kb downstream 0.5kb downstream 500 false Bd3: 37184079-37184578 Brachypodium distachyon
Bradi3g35080 1.0kb upstream 1.0kb upstream 3853 true Bd3: 37180226-37184078 Brachypodium distachyon
Bradi3g35080 1.0kb upstream 1.0kb upstream 1000 false Bd3: 37180226-37181225 Brachypodium distachyon
Bradi3g35080 1.0kb downstream 1.0kb downstream 3853 true Bd3: 37181226-37185078 Brachypodium distachyon
Bradi3g35080 1.0kb downstream 1.0kb downstream 1000 false Bd3: 37184079-37185078 Brachypodium distachyon
Bradi3g35080 2.0kb upstream 2.0kb upstream 4853 true Bd3: 37179226-37184078 Brachypodium distachyon
Bradi3g35080 2.0kb upstream 2.0kb upstream 2000 false Bd3: 37179226-37181225 Brachypodium distachyon
Bradi3g35080 2.0kb downstream 2.0kb downstream 4853 true Bd3: 37181226-37186078 Brachypodium distachyon
Bradi3g35080 2.0kb downstream 2.0kb downstream 2000 false Bd3: 37184079-37186078 Brachypodium distachyon
Bradi3g35080 5.0kb upstream 5.0kb upstream 7853 true Bd3: 37176226-37184078 Brachypodium distachyon
Bradi3g35080 5.0kb upstream 5.0kb upstream 5000 false Bd3: 37176226-37181225 Brachypodium distachyon
Bradi3g35080 5.0kb downstream 5.0kb downstream 7853 true Bd3: 37181226-37189078 Brachypodium distachyon
Bradi3g35080 5.0kb downstream 5.0kb downstream 5000 false Bd3: 37184079-37189078 Brachypodium distachyon
Bradi3g35080 10.0kb upstream 10.0kb upstream 12853 true Bd3: 37171226-37184078 Brachypodium distachyon
Bradi3g35080 10.0kb upstream 10.0kb upstream 10000 false Bd3: 37171226-37181225 Brachypodium distachyon
Bradi3g35080 10.0kb downstream 10.0kb downstream 12853 true Bd3: 37181226-37194078 Brachypodium distachyon
Bradi3g35080 10.0kb downstream 10.0kb downstream 10000 false Bd3: 37184079-37194078 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576199 5269 Grass View MSA
122048117 5273 Angiosperm View MSA
121310853 5274 Embryophyte View MSA
123348238 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.984       Low
cufflinks 4.697        
cufflinks 4.069        
cufflinks 4.548        
cufflinks 3.698        
cufflinks 4.173        
cufflinks 4.063        
cufflinks 4.482        
cufflinks 4.744        
cufflinks 3.877        
cufflinks 3.698        
cufflinks 5.04        
cufflinks 3.569        
cufflinks 3.701        
cufflinks 5.328        
cufflinks 3.545        
cufflinks 3.44        
cufflinks 7.63       High
cufflinks 2.857       Low
cufflinks 5.598        
cufflinks 5.459        
cufflinks 4.012        
cufflinks 5.075        
cufflinks 5.486        
cufflinks 4.925        
cufflinks 4.193        
cufflinks 5.597        
cufflinks 4.404        
cufflinks 4.293        
cufflinks 6.035       High

0 Strain