Gene : Bradi3g35400 B. distachyon v3.1
Defline:  (1 of 6) PTHR19229 - ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA Genomic Order:  4323
Name:  ? Bradi3g35400 Secondary Identifier:  ? PAC:32823524
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g35400 0.5kb upstream 0.5kb upstream 9961 true Bd3: 37426408-37436368 Brachypodium distachyon
Bradi3g35400 0.5kb upstream 0.5kb upstream 500 false Bd3: 37426408-37426907 Brachypodium distachyon
Bradi3g35400 0.5kb downstream 0.5kb downstream 9961 true Bd3: 37426908-37436868 Brachypodium distachyon
Bradi3g35400 0.5kb downstream 0.5kb downstream 500 false Bd3: 37436369-37436868 Brachypodium distachyon
Bradi3g35400 1.0kb upstream 1.0kb upstream 10461 true Bd3: 37425908-37436368 Brachypodium distachyon
Bradi3g35400 1.0kb upstream 1.0kb upstream 1000 false Bd3: 37425908-37426907 Brachypodium distachyon
Bradi3g35400 1.0kb downstream 1.0kb downstream 10461 true Bd3: 37426908-37437368 Brachypodium distachyon
Bradi3g35400 1.0kb downstream 1.0kb downstream 1000 false Bd3: 37436369-37437368 Brachypodium distachyon
Bradi3g35400 2.0kb upstream 2.0kb upstream 11461 true Bd3: 37424908-37436368 Brachypodium distachyon
Bradi3g35400 2.0kb upstream 2.0kb upstream 2000 false Bd3: 37424908-37426907 Brachypodium distachyon
Bradi3g35400 2.0kb downstream 2.0kb downstream 11461 true Bd3: 37426908-37438368 Brachypodium distachyon
Bradi3g35400 2.0kb downstream 2.0kb downstream 2000 false Bd3: 37436369-37438368 Brachypodium distachyon
Bradi3g35400 5.0kb upstream 5.0kb upstream 14461 true Bd3: 37421908-37436368 Brachypodium distachyon
Bradi3g35400 5.0kb upstream 5.0kb upstream 5000 false Bd3: 37421908-37426907 Brachypodium distachyon
Bradi3g35400 5.0kb downstream 5.0kb downstream 14461 true Bd3: 37426908-37441368 Brachypodium distachyon
Bradi3g35400 5.0kb downstream 5.0kb downstream 5000 false Bd3: 37436369-37441368 Brachypodium distachyon
Bradi3g35400 10.0kb upstream 10.0kb upstream 19461 true Bd3: 37416908-37436368 Brachypodium distachyon
Bradi3g35400 10.0kb upstream 10.0kb upstream 10000 false Bd3: 37416908-37426907 Brachypodium distachyon
Bradi3g35400 10.0kb downstream 10.0kb downstream 19461 true Bd3: 37426908-37446368 Brachypodium distachyon
Bradi3g35400 10.0kb downstream 10.0kb downstream 10000 false Bd3: 37436369-37446368 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124576476 5269 Grass View MSA
122046360 5273 Angiosperm View MSA
123429075 5275 Viridiplantae View MSA
121347402 5274 Embryophyte View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.695        
cufflinks 0.493        
cufflinks 0.617        
cufflinks 0.478        
cufflinks 1.406        
cufflinks 0.408        
cufflinks 0.405        
cufflinks 0.68        
cufflinks 0.53        
cufflinks 0.402        
cufflinks 2.044       High
cufflinks 0.723        
cufflinks 0.668        
cufflinks 0.754        
cufflinks 0.913        
cufflinks 0.474        
cufflinks 0.373        
cufflinks 2.849       High
cufflinks 6.537       High
cufflinks 3.448       High
cufflinks 0.408        
cufflinks 0.763        
cufflinks 0.817        
cufflinks 0.498        
cufflinks 0.342       Low
cufflinks 0.686        
cufflinks 1.377        
cufflinks 0.717        
cufflinks 0.736        
cufflinks 0.535        

0 Strain