Gene : Bradi3g35350 B. distachyon v3.1
Defline:  (1 of 3) K08776 - puromycin-sensitive aminopeptidase [EC:3.4.11.-] (NPEPPS) Genomic Order:  4317
Name:  ? Bradi3g35350 Secondary Identifier:  ? PAC:32815123
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-6842 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g35350 0.5kb upstream 0.5kb upstream 8086 true Bd3: 37387113-37395198 Brachypodium distachyon
Bradi3g35350 0.5kb upstream 0.5kb upstream 500 false Bd3: 37394699-37395198 Brachypodium distachyon
Bradi3g35350 0.5kb downstream 0.5kb downstream 8086 true Bd3: 37386613-37394698 Brachypodium distachyon
Bradi3g35350 0.5kb downstream 0.5kb downstream 500 false Bd3: 37386613-37387112 Brachypodium distachyon
Bradi3g35350 1.0kb upstream 1.0kb upstream 8586 true Bd3: 37387113-37395698 Brachypodium distachyon
Bradi3g35350 1.0kb upstream 1.0kb upstream 1000 false Bd3: 37394699-37395698 Brachypodium distachyon
Bradi3g35350 1.0kb downstream 1.0kb downstream 8586 true Bd3: 37386113-37394698 Brachypodium distachyon
Bradi3g35350 1.0kb downstream 1.0kb downstream 1000 false Bd3: 37386113-37387112 Brachypodium distachyon
Bradi3g35350 2.0kb upstream 2.0kb upstream 9586 true Bd3: 37387113-37396698 Brachypodium distachyon
Bradi3g35350 2.0kb upstream 2.0kb upstream 2000 false Bd3: 37394699-37396698 Brachypodium distachyon
Bradi3g35350 2.0kb downstream 2.0kb downstream 9586 true Bd3: 37385113-37394698 Brachypodium distachyon
Bradi3g35350 2.0kb downstream 2.0kb downstream 2000 false Bd3: 37385113-37387112 Brachypodium distachyon
Bradi3g35350 5.0kb upstream 5.0kb upstream 12586 true Bd3: 37387113-37399698 Brachypodium distachyon
Bradi3g35350 5.0kb upstream 5.0kb upstream 5000 false Bd3: 37394699-37399698 Brachypodium distachyon
Bradi3g35350 5.0kb downstream 5.0kb downstream 12586 true Bd3: 37382113-37394698 Brachypodium distachyon
Bradi3g35350 5.0kb downstream 5.0kb downstream 5000 false Bd3: 37382113-37387112 Brachypodium distachyon
Bradi3g35350 10.0kb upstream 10.0kb upstream 17586 true Bd3: 37387113-37404698 Brachypodium distachyon
Bradi3g35350 10.0kb upstream 10.0kb upstream 10000 false Bd3: 37394699-37404698 Brachypodium distachyon
Bradi3g35350 10.0kb downstream 10.0kb downstream 17586 true Bd3: 37377113-37394698 Brachypodium distachyon
Bradi3g35350 10.0kb downstream 10.0kb downstream 10000 false Bd3: 37377113-37387112 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124573180 5269 Grass View MSA
122045992 5273 Angiosperm View MSA
121349880 5274 Embryophyte View MSA
123428340 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.81        
cufflinks 9.105        
cufflinks 9.65        
cufflinks 7.065        
cufflinks 4.659        
cufflinks 8.005        
cufflinks 7.814        
cufflinks 6.513        
cufflinks 7.188        
cufflinks 4.62        
cufflinks 4.762        
cufflinks 8.003        
cufflinks 3.83       Low
cufflinks 3.811       Low
cufflinks 4.362        
cufflinks 9.211        
cufflinks 6.466        
cufflinks 19.339     High High
cufflinks 9.951        
cufflinks 2.765       Low
cufflinks 9.131        
cufflinks 8.98        
cufflinks 6.81        
cufflinks 6.741        
cufflinks 6.017        
cufflinks 7.653        
cufflinks 3.856       Low
cufflinks 7.474        
cufflinks 7.568        
cufflinks 11.684     High High

0 Strain