Gene : Bradi3g35550 B. distachyon v3.1
Defline:  (1 of 3) PTHR22847//PTHR22847:SF453 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  4343
Name:  ? Bradi3g35550 Secondary Identifier:  ? PAC:32814871
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g35550 0.5kb upstream 0.5kb upstream 5538 true Bd3: 37595962-37601499 Brachypodium distachyon
Bradi3g35550 0.5kb upstream 0.5kb upstream 500 false Bd3: 37595962-37596461 Brachypodium distachyon
Bradi3g35550 0.5kb downstream 0.5kb downstream 5538 true Bd3: 37596462-37601999 Brachypodium distachyon
Bradi3g35550 0.5kb downstream 0.5kb downstream 500 false Bd3: 37601500-37601999 Brachypodium distachyon
Bradi3g35550 1.0kb upstream 1.0kb upstream 6038 true Bd3: 37595462-37601499 Brachypodium distachyon
Bradi3g35550 1.0kb upstream 1.0kb upstream 1000 false Bd3: 37595462-37596461 Brachypodium distachyon
Bradi3g35550 1.0kb downstream 1.0kb downstream 6038 true Bd3: 37596462-37602499 Brachypodium distachyon
Bradi3g35550 1.0kb downstream 1.0kb downstream 1000 false Bd3: 37601500-37602499 Brachypodium distachyon
Bradi3g35550 2.0kb upstream 2.0kb upstream 7038 true Bd3: 37594462-37601499 Brachypodium distachyon
Bradi3g35550 2.0kb upstream 2.0kb upstream 2000 false Bd3: 37594462-37596461 Brachypodium distachyon
Bradi3g35550 2.0kb downstream 2.0kb downstream 7038 true Bd3: 37596462-37603499 Brachypodium distachyon
Bradi3g35550 2.0kb downstream 2.0kb downstream 2000 false Bd3: 37601500-37603499 Brachypodium distachyon
Bradi3g35550 5.0kb upstream 5.0kb upstream 10038 true Bd3: 37591462-37601499 Brachypodium distachyon
Bradi3g35550 5.0kb upstream 5.0kb upstream 5000 false Bd3: 37591462-37596461 Brachypodium distachyon
Bradi3g35550 5.0kb downstream 5.0kb downstream 10038 true Bd3: 37596462-37606499 Brachypodium distachyon
Bradi3g35550 5.0kb downstream 5.0kb downstream 5000 false Bd3: 37601500-37606499 Brachypodium distachyon
Bradi3g35550 10.0kb upstream 10.0kb upstream 15038 true Bd3: 37586462-37601499 Brachypodium distachyon
Bradi3g35550 10.0kb upstream 10.0kb upstream 10000 false Bd3: 37586462-37596461 Brachypodium distachyon
Bradi3g35550 10.0kb downstream 10.0kb downstream 15038 true Bd3: 37596462-37611499 Brachypodium distachyon
Bradi3g35550 10.0kb downstream 10.0kb downstream 10000 false Bd3: 37601500-37611499 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124572509 5269 Grass View MSA
122045317 5273 Angiosperm View MSA
121348063 5274 Embryophyte View MSA
123428605 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.007        
cufflinks 9.309        
cufflinks 10.075        
cufflinks 9.976        
cufflinks 30.164     High High
cufflinks 8.746        
cufflinks 8.549        
cufflinks 9.413     High  
cufflinks 8.7        
cufflinks 9.176        
cufflinks 20.123     High High
cufflinks 14.156     High  
cufflinks 11.82     High  
cufflinks 11.523     High  
cufflinks 13.02     High  
cufflinks 9.773     High  
cufflinks 8.429        
cufflinks 10.561        
cufflinks 10.231        
cufflinks 32.135     High High
cufflinks 6.717       Low
cufflinks 9.477        
cufflinks 8.308        
cufflinks 8.331        
cufflinks 8.705        
cufflinks 11.234     High  
cufflinks 10.462     High  
cufflinks 10.2        
cufflinks 9.208        
cufflinks 10.914        

0 Strain