Gene : Bradi3g35517 B. distachyon v3.1
Defline:  (1 of 1) PTHR11649:SF56 - TRNA MODIFICATION GTPASE GTPBP3, MITOCHONDRIAL Genomic Order:  4337
Name:  ? Bradi3g35517 Secondary Identifier:  ? PAC:32817693
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g35517 0.5kb upstream 0.5kb upstream 5374 true Bd3: 37567355-37572728 Brachypodium distachyon
Bradi3g35517 0.5kb upstream 0.5kb upstream 500 false Bd3: 37567355-37567854 Brachypodium distachyon
Bradi3g35517 0.5kb downstream 0.5kb downstream 5374 true Bd3: 37567855-37573228 Brachypodium distachyon
Bradi3g35517 0.5kb downstream 0.5kb downstream 500 false Bd3: 37572729-37573228 Brachypodium distachyon
Bradi3g35517 1.0kb upstream 1.0kb upstream 5874 true Bd3: 37566855-37572728 Brachypodium distachyon
Bradi3g35517 1.0kb upstream 1.0kb upstream 1000 false Bd3: 37566855-37567854 Brachypodium distachyon
Bradi3g35517 1.0kb downstream 1.0kb downstream 5874 true Bd3: 37567855-37573728 Brachypodium distachyon
Bradi3g35517 1.0kb downstream 1.0kb downstream 1000 false Bd3: 37572729-37573728 Brachypodium distachyon
Bradi3g35517 2.0kb upstream 2.0kb upstream 6874 true Bd3: 37565855-37572728 Brachypodium distachyon
Bradi3g35517 2.0kb upstream 2.0kb upstream 2000 false Bd3: 37565855-37567854 Brachypodium distachyon
Bradi3g35517 2.0kb downstream 2.0kb downstream 6874 true Bd3: 37567855-37574728 Brachypodium distachyon
Bradi3g35517 2.0kb downstream 2.0kb downstream 2000 false Bd3: 37572729-37574728 Brachypodium distachyon
Bradi3g35517 5.0kb upstream 5.0kb upstream 9874 true Bd3: 37562855-37572728 Brachypodium distachyon
Bradi3g35517 5.0kb upstream 5.0kb upstream 5000 false Bd3: 37562855-37567854 Brachypodium distachyon
Bradi3g35517 5.0kb downstream 5.0kb downstream 9874 true Bd3: 37567855-37577728 Brachypodium distachyon
Bradi3g35517 5.0kb downstream 5.0kb downstream 5000 false Bd3: 37572729-37577728 Brachypodium distachyon
Bradi3g35517 10.0kb upstream 10.0kb upstream 14874 true Bd3: 37557855-37572728 Brachypodium distachyon
Bradi3g35517 10.0kb upstream 10.0kb upstream 10000 false Bd3: 37557855-37567854 Brachypodium distachyon
Bradi3g35517 10.0kb downstream 10.0kb downstream 14874 true Bd3: 37567855-37582728 Brachypodium distachyon
Bradi3g35517 10.0kb downstream 10.0kb downstream 10000 false Bd3: 37572729-37582728 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124570771 5269 Grass View MSA
122042865 5273 Angiosperm View MSA
121344741 5274 Embryophyte View MSA
123428429 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.441        
cufflinks 7.662       High
cufflinks 6.839        
cufflinks 7.361       High
cufflinks 2.439       Low
cufflinks 5.56        
cufflinks 6.439        
cufflinks 4.127        
cufflinks 5.208        
cufflinks 4.562        
cufflinks 4.458        
cufflinks 4.705        
cufflinks 3.065        
cufflinks 4.189        
cufflinks 3.588        
cufflinks 5.481        
cufflinks 4.023        
cufflinks 2.126       Low
cufflinks 3.823        
cufflinks 1.211       Low
cufflinks 3.255        
cufflinks 4.808        
cufflinks 4.192        
cufflinks 4.963        
cufflinks 5.976        
cufflinks 6.651        
cufflinks 4.008        
cufflinks 5.944        
cufflinks 5.119        
cufflinks 4.548        

0 Strain