Gene : Bradi3g35670 B. distachyon v3.1
Defline:  (1 of 8) PF07676 - WD40-like Beta Propeller Repeat (PD40) Genomic Order:  4361
Name:  ? Bradi3g35670 Secondary Identifier:  ? PAC:32821463
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g35670 0.5kb upstream 0.5kb upstream 2753 true Bd3: 37725728-37728480 Brachypodium distachyon
Bradi3g35670 0.5kb upstream 0.5kb upstream 500 false Bd3: 37725728-37726227 Brachypodium distachyon
Bradi3g35670 0.5kb downstream 0.5kb downstream 2753 true Bd3: 37726228-37728980 Brachypodium distachyon
Bradi3g35670 0.5kb downstream 0.5kb downstream 500 false Bd3: 37728481-37728980 Brachypodium distachyon
Bradi3g35670 1.0kb upstream 1.0kb upstream 3253 true Bd3: 37725228-37728480 Brachypodium distachyon
Bradi3g35670 1.0kb upstream 1.0kb upstream 1000 false Bd3: 37725228-37726227 Brachypodium distachyon
Bradi3g35670 1.0kb downstream 1.0kb downstream 3253 true Bd3: 37726228-37729480 Brachypodium distachyon
Bradi3g35670 1.0kb downstream 1.0kb downstream 1000 false Bd3: 37728481-37729480 Brachypodium distachyon
Bradi3g35670 2.0kb upstream 2.0kb upstream 4253 true Bd3: 37724228-37728480 Brachypodium distachyon
Bradi3g35670 2.0kb upstream 2.0kb upstream 2000 false Bd3: 37724228-37726227 Brachypodium distachyon
Bradi3g35670 2.0kb downstream 2.0kb downstream 4253 true Bd3: 37726228-37730480 Brachypodium distachyon
Bradi3g35670 2.0kb downstream 2.0kb downstream 2000 false Bd3: 37728481-37730480 Brachypodium distachyon
Bradi3g35670 5.0kb upstream 5.0kb upstream 7253 true Bd3: 37721228-37728480 Brachypodium distachyon
Bradi3g35670 5.0kb upstream 5.0kb upstream 5000 false Bd3: 37721228-37726227 Brachypodium distachyon
Bradi3g35670 5.0kb downstream 5.0kb downstream 7253 true Bd3: 37726228-37733480 Brachypodium distachyon
Bradi3g35670 5.0kb downstream 5.0kb downstream 5000 false Bd3: 37728481-37733480 Brachypodium distachyon
Bradi3g35670 10.0kb upstream 10.0kb upstream 12253 true Bd3: 37716228-37728480 Brachypodium distachyon
Bradi3g35670 10.0kb upstream 10.0kb upstream 10000 false Bd3: 37716228-37726227 Brachypodium distachyon
Bradi3g35670 10.0kb downstream 10.0kb downstream 12253 true Bd3: 37726228-37738480 Brachypodium distachyon
Bradi3g35670 10.0kb downstream 10.0kb downstream 10000 false Bd3: 37728481-37738480 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028106 5273 Angiosperm View MSA
124587409 5269 Grass View MSA
121297649 5274 Embryophyte View MSA
123335684 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.462        
cufflinks 6.203        
cufflinks 11.14     High  
cufflinks 4.852        
cufflinks 85.28     High High
cufflinks 6.437        
cufflinks 7.385        
cufflinks 9.522     High  
cufflinks 8.271        
cufflinks 7.202        
cufflinks 0.008     Low Low
cufflinks 6.168        
cufflinks 1.303        
cufflinks 0.016     Low Low
cufflinks 6.063        
cufflinks 4.368        
cufflinks 5.23        
cufflinks 0.789        
cufflinks 27.679     High High
cufflinks 5.601        
cufflinks 0.155       Low
cufflinks 9.642        
cufflinks 12.394     High  
cufflinks 8.635        
cufflinks 5.389        
cufflinks 11.975     High  
cufflinks 0.033     Low Low
cufflinks 12.674     High  
cufflinks 10.155        
cufflinks 15.305     High  

0 Strain