Gene : Bradi3g35680 B. distachyon v3.1
Defline:  (1 of 8) PF07676 - WD40-like Beta Propeller Repeat (PD40) Genomic Order:  4362
Name:  ? Bradi3g35680 Secondary Identifier:  ? PAC:32816678
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g35680 0.5kb upstream 0.5kb upstream 2759 true Bd3: 37729872-37732630 Brachypodium distachyon
Bradi3g35680 0.5kb upstream 0.5kb upstream 500 false Bd3: 37732131-37732630 Brachypodium distachyon
Bradi3g35680 0.5kb downstream 0.5kb downstream 2759 true Bd3: 37729372-37732130 Brachypodium distachyon
Bradi3g35680 0.5kb downstream 0.5kb downstream 500 false Bd3: 37729372-37729871 Brachypodium distachyon
Bradi3g35680 1.0kb upstream 1.0kb upstream 3259 true Bd3: 37729872-37733130 Brachypodium distachyon
Bradi3g35680 1.0kb upstream 1.0kb upstream 1000 false Bd3: 37732131-37733130 Brachypodium distachyon
Bradi3g35680 1.0kb downstream 1.0kb downstream 3259 true Bd3: 37728872-37732130 Brachypodium distachyon
Bradi3g35680 1.0kb downstream 1.0kb downstream 1000 false Bd3: 37728872-37729871 Brachypodium distachyon
Bradi3g35680 2.0kb upstream 2.0kb upstream 4259 true Bd3: 37729872-37734130 Brachypodium distachyon
Bradi3g35680 2.0kb upstream 2.0kb upstream 2000 false Bd3: 37732131-37734130 Brachypodium distachyon
Bradi3g35680 2.0kb downstream 2.0kb downstream 4259 true Bd3: 37727872-37732130 Brachypodium distachyon
Bradi3g35680 2.0kb downstream 2.0kb downstream 2000 false Bd3: 37727872-37729871 Brachypodium distachyon
Bradi3g35680 5.0kb upstream 5.0kb upstream 7259 true Bd3: 37729872-37737130 Brachypodium distachyon
Bradi3g35680 5.0kb upstream 5.0kb upstream 5000 false Bd3: 37732131-37737130 Brachypodium distachyon
Bradi3g35680 5.0kb downstream 5.0kb downstream 7259 true Bd3: 37724872-37732130 Brachypodium distachyon
Bradi3g35680 5.0kb downstream 5.0kb downstream 5000 false Bd3: 37724872-37729871 Brachypodium distachyon
Bradi3g35680 10.0kb upstream 10.0kb upstream 12259 true Bd3: 37729872-37742130 Brachypodium distachyon
Bradi3g35680 10.0kb upstream 10.0kb upstream 10000 false Bd3: 37732131-37742130 Brachypodium distachyon
Bradi3g35680 10.0kb downstream 10.0kb downstream 12259 true Bd3: 37719872-37732130 Brachypodium distachyon
Bradi3g35680 10.0kb downstream 10.0kb downstream 10000 false Bd3: 37719872-37729871 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028106 5273 Angiosperm View MSA
124587409 5269 Grass View MSA
121297649 5274 Embryophyte View MSA
123335684 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.904     High  
cufflinks 46.77     High  
cufflinks 85.563     High High
cufflinks 48.677     High  
cufflinks 182.586     High High
cufflinks 41.079     High  
cufflinks 52.058     High  
cufflinks 68.112     High  
cufflinks 46.613     High  
cufflinks 14.251     High  
cufflinks 10.503     High  
cufflinks 37.657     High  
cufflinks 33.228     High  
cufflinks 20.903     High  
cufflinks 53.581     High  
cufflinks 35.508     High  
cufflinks 23.74     High  
cufflinks 1.525       Low
cufflinks 63.638     High  
cufflinks 12.195     High  
cufflinks 0.511       Low
cufflinks 13.587     High  
cufflinks 65.13     High  
cufflinks 49.757     High  
cufflinks 42.497     High  
cufflinks 47.932     High  
cufflinks 6.675       Low
cufflinks 36.66     High  
cufflinks 19.155     High  
cufflinks 67.967     High  

0 Strain