Gene : Bradi3g35830 B. distachyon v3.1
Defline:  (1 of 2) PTHR23315//PTHR23315:SF116 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 18-RELATED Genomic Order:  4381
Name:  ? Bradi3g35830 Secondary Identifier:  ? PAC:32818769
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-7511 Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g35830 0.5kb upstream 0.5kb upstream 4367 true Bd3: 37850927-37855293 Brachypodium distachyon
Bradi3g35830 0.5kb upstream 0.5kb upstream 500 false Bd3: 37850927-37851426 Brachypodium distachyon
Bradi3g35830 0.5kb downstream 0.5kb downstream 4367 true Bd3: 37851427-37855793 Brachypodium distachyon
Bradi3g35830 0.5kb downstream 0.5kb downstream 500 false Bd3: 37855294-37855793 Brachypodium distachyon
Bradi3g35830 1.0kb upstream 1.0kb upstream 4867 true Bd3: 37850427-37855293 Brachypodium distachyon
Bradi3g35830 1.0kb upstream 1.0kb upstream 1000 false Bd3: 37850427-37851426 Brachypodium distachyon
Bradi3g35830 1.0kb downstream 1.0kb downstream 4867 true Bd3: 37851427-37856293 Brachypodium distachyon
Bradi3g35830 1.0kb downstream 1.0kb downstream 1000 false Bd3: 37855294-37856293 Brachypodium distachyon
Bradi3g35830 2.0kb upstream 2.0kb upstream 5867 true Bd3: 37849427-37855293 Brachypodium distachyon
Bradi3g35830 2.0kb upstream 2.0kb upstream 2000 false Bd3: 37849427-37851426 Brachypodium distachyon
Bradi3g35830 2.0kb downstream 2.0kb downstream 5867 true Bd3: 37851427-37857293 Brachypodium distachyon
Bradi3g35830 2.0kb downstream 2.0kb downstream 2000 false Bd3: 37855294-37857293 Brachypodium distachyon
Bradi3g35830 5.0kb upstream 5.0kb upstream 8867 true Bd3: 37846427-37855293 Brachypodium distachyon
Bradi3g35830 5.0kb upstream 5.0kb upstream 5000 false Bd3: 37846427-37851426 Brachypodium distachyon
Bradi3g35830 5.0kb downstream 5.0kb downstream 8867 true Bd3: 37851427-37860293 Brachypodium distachyon
Bradi3g35830 5.0kb downstream 5.0kb downstream 5000 false Bd3: 37855294-37860293 Brachypodium distachyon
Bradi3g35830 10.0kb upstream 10.0kb upstream 13867 true Bd3: 37841427-37855293 Brachypodium distachyon
Bradi3g35830 10.0kb upstream 10.0kb upstream 10000 false Bd3: 37841427-37851426 Brachypodium distachyon
Bradi3g35830 10.0kb downstream 10.0kb downstream 13867 true Bd3: 37851427-37865293 Brachypodium distachyon
Bradi3g35830 10.0kb downstream 10.0kb downstream 10000 false Bd3: 37855294-37865293 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124577159 5269 Grass View MSA
122046188 5273 Angiosperm View MSA
121310571 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.019     Low  
cufflinks 0.007     Low  
cufflinks 0.007     Low  
cufflinks 0.004     Low Low
cufflinks 15.165     High High
cufflinks 0.004     Low Low
cufflinks 0.011     Low  
cufflinks 0.099        
cufflinks 0.02     Low  
cufflinks 0.017     Low  
cufflinks 0.163        
cufflinks 0.074     Low  
cufflinks 0.004     Low Low
cufflinks 0.006     Low  
cufflinks 0.057     Low  
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.043     Low  
cufflinks 1.458       High
cufflinks 13.328     High High
cufflinks 0.016     Low  
cufflinks 0.008     Low  
cufflinks 0.057     Low  
cufflinks 0.044     Low  
cufflinks 0.007     Low  
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.02     Low  

0 Strain