Gene : Bradi3g35900 B. distachyon v3.1
Defline:  (1 of 5) PF11833 - Protein of unknown function (DUF3353) (DUF3353) Genomic Order:  4390
Name:  ? Bradi3g35900 Secondary Identifier:  ? PAC:32818796
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g35900 0.5kb upstream 0.5kb upstream 5021 true Bd3: 37898799-37903819 Brachypodium distachyon
Bradi3g35900 0.5kb upstream 0.5kb upstream 500 false Bd3: 37898799-37899298 Brachypodium distachyon
Bradi3g35900 0.5kb downstream 0.5kb downstream 5021 true Bd3: 37899299-37904319 Brachypodium distachyon
Bradi3g35900 0.5kb downstream 0.5kb downstream 500 false Bd3: 37903820-37904319 Brachypodium distachyon
Bradi3g35900 1.0kb upstream 1.0kb upstream 5521 true Bd3: 37898299-37903819 Brachypodium distachyon
Bradi3g35900 1.0kb upstream 1.0kb upstream 1000 false Bd3: 37898299-37899298 Brachypodium distachyon
Bradi3g35900 1.0kb downstream 1.0kb downstream 5521 true Bd3: 37899299-37904819 Brachypodium distachyon
Bradi3g35900 1.0kb downstream 1.0kb downstream 1000 false Bd3: 37903820-37904819 Brachypodium distachyon
Bradi3g35900 2.0kb upstream 2.0kb upstream 6521 true Bd3: 37897299-37903819 Brachypodium distachyon
Bradi3g35900 2.0kb upstream 2.0kb upstream 2000 false Bd3: 37897299-37899298 Brachypodium distachyon
Bradi3g35900 2.0kb downstream 2.0kb downstream 6521 true Bd3: 37899299-37905819 Brachypodium distachyon
Bradi3g35900 2.0kb downstream 2.0kb downstream 2000 false Bd3: 37903820-37905819 Brachypodium distachyon
Bradi3g35900 5.0kb upstream 5.0kb upstream 9521 true Bd3: 37894299-37903819 Brachypodium distachyon
Bradi3g35900 5.0kb upstream 5.0kb upstream 5000 false Bd3: 37894299-37899298 Brachypodium distachyon
Bradi3g35900 5.0kb downstream 5.0kb downstream 9521 true Bd3: 37899299-37908819 Brachypodium distachyon
Bradi3g35900 5.0kb downstream 5.0kb downstream 5000 false Bd3: 37903820-37908819 Brachypodium distachyon
Bradi3g35900 10.0kb upstream 10.0kb upstream 14521 true Bd3: 37889299-37903819 Brachypodium distachyon
Bradi3g35900 10.0kb upstream 10.0kb upstream 10000 false Bd3: 37889299-37899298 Brachypodium distachyon
Bradi3g35900 10.0kb downstream 10.0kb downstream 14521 true Bd3: 37899299-37913819 Brachypodium distachyon
Bradi3g35900 10.0kb downstream 10.0kb downstream 10000 false Bd3: 37903820-37913819 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124574939 5269 Grass View MSA
122050900 5273 Angiosperm View MSA
121343809 5274 Embryophyte View MSA
123427732 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.814       Low
cufflinks 5.393       High
cufflinks 5.042        
cufflinks 5.089       High
cufflinks 2.565       Low
cufflinks 4.408        
cufflinks 4.917        
cufflinks 3.953        
cufflinks 3.688        
cufflinks 3.7        
cufflinks 3.723        
cufflinks 4.055        
cufflinks 3.116        
cufflinks 3.493        
cufflinks 3.265        
cufflinks 4.497        
cufflinks 3.797        
cufflinks 4.222        
cufflinks 2.941       Low
cufflinks 3.096        
cufflinks 3.728        
cufflinks 4.298        
cufflinks 3.96        
cufflinks 4.042        
cufflinks 4.738        
cufflinks 4.97        
cufflinks 3.145        
cufflinks 5.055        
cufflinks 4.526        
cufflinks 4.737        

0 Strain