Gene : Bradi3g36487 B. distachyon v3.1
Defline:  (1 of 1) PTHR22870//PTHR22870:SF206 - REGULATOR OF CHROMOSOME CONDENSATION Genomic Order:  4464
Name:  ? Bradi3g36487 Secondary Identifier:  ? PAC:32818767
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g36487 0.5kb upstream 0.5kb upstream 4612 true Bd3: 38588888-38593499 Brachypodium distachyon
Bradi3g36487 0.5kb upstream 0.5kb upstream 500 false Bd3: 38593000-38593499 Brachypodium distachyon
Bradi3g36487 0.5kb downstream 0.5kb downstream 4612 true Bd3: 38588388-38592999 Brachypodium distachyon
Bradi3g36487 0.5kb downstream 0.5kb downstream 500 false Bd3: 38588388-38588887 Brachypodium distachyon
Bradi3g36487 1.0kb upstream 1.0kb upstream 5112 true Bd3: 38588888-38593999 Brachypodium distachyon
Bradi3g36487 1.0kb upstream 1.0kb upstream 1000 false Bd3: 38593000-38593999 Brachypodium distachyon
Bradi3g36487 1.0kb downstream 1.0kb downstream 5112 true Bd3: 38587888-38592999 Brachypodium distachyon
Bradi3g36487 1.0kb downstream 1.0kb downstream 1000 false Bd3: 38587888-38588887 Brachypodium distachyon
Bradi3g36487 2.0kb upstream 2.0kb upstream 6112 true Bd3: 38588888-38594999 Brachypodium distachyon
Bradi3g36487 2.0kb upstream 2.0kb upstream 2000 false Bd3: 38593000-38594999 Brachypodium distachyon
Bradi3g36487 2.0kb downstream 2.0kb downstream 6112 true Bd3: 38586888-38592999 Brachypodium distachyon
Bradi3g36487 2.0kb downstream 2.0kb downstream 2000 false Bd3: 38586888-38588887 Brachypodium distachyon
Bradi3g36487 5.0kb upstream 5.0kb upstream 9112 true Bd3: 38588888-38597999 Brachypodium distachyon
Bradi3g36487 5.0kb upstream 5.0kb upstream 5000 false Bd3: 38593000-38597999 Brachypodium distachyon
Bradi3g36487 5.0kb downstream 5.0kb downstream 9112 true Bd3: 38583888-38592999 Brachypodium distachyon
Bradi3g36487 5.0kb downstream 5.0kb downstream 5000 false Bd3: 38583888-38588887 Brachypodium distachyon
Bradi3g36487 10.0kb upstream 10.0kb upstream 14112 true Bd3: 38588888-38602999 Brachypodium distachyon
Bradi3g36487 10.0kb upstream 10.0kb upstream 10000 false Bd3: 38593000-38602999 Brachypodium distachyon
Bradi3g36487 10.0kb downstream 10.0kb downstream 14112 true Bd3: 38578888-38592999 Brachypodium distachyon
Bradi3g36487 10.0kb downstream 10.0kb downstream 10000 false Bd3: 38578888-38588887 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124569951 5269 Grass View MSA
122042833 5273 Angiosperm View MSA
121348497 5274 Embryophyte View MSA
123428657 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.006        
cufflinks 7.637        
cufflinks 8.645       High
cufflinks 7.045        
cufflinks 6.207        
cufflinks 5.689        
cufflinks 6.325        
cufflinks 4.88        
cufflinks 5.571        
cufflinks 4.907        
cufflinks 2.45       Low
cufflinks 4.774        
cufflinks 1.646       Low
cufflinks 2.039       Low
cufflinks 3.387        
cufflinks 6.93        
cufflinks 4.641        
cufflinks 8.129       High
cufflinks 3.546        
cufflinks 1.908       Low
cufflinks 5.385        
cufflinks 5.373        
cufflinks 4.422        
cufflinks 4.168        
cufflinks 6.224        
cufflinks 7.262        
cufflinks 2.368       Low
cufflinks 7.471        
cufflinks 6.562        
cufflinks 6.357        

0 Strain