Gene : Bradi3g36520 B. distachyon v3.1
Defline:  (1 of 2) PTHR23151//PTHR23151:SF67 - DIHYDROLIPOAMIDE ACETYL/SUCCINYL-TRANSFERASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  4469
Name:  ? Bradi3g36520 Secondary Identifier:  ? PAC:32813633
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Bdistachyon PWY-5173 Brachypodium distachyon pathologic  
Bdistachyon PWY-5464 Brachypodium distachyon pathologic  
Bdistachyon PYRUVDEHYD-PWY Brachypodium distachyon pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Bradi3g36520 0.5kb upstream 0.5kb upstream 3273 true Bd3: 38618212-38621484 Brachypodium distachyon
Bradi3g36520 0.5kb upstream 0.5kb upstream 500 false Bd3: 38620985-38621484 Brachypodium distachyon
Bradi3g36520 0.5kb downstream 0.5kb downstream 3273 true Bd3: 38617712-38620984 Brachypodium distachyon
Bradi3g36520 0.5kb downstream 0.5kb downstream 500 false Bd3: 38617712-38618211 Brachypodium distachyon
Bradi3g36520 1.0kb upstream 1.0kb upstream 3773 true Bd3: 38618212-38621984 Brachypodium distachyon
Bradi3g36520 1.0kb upstream 1.0kb upstream 1000 false Bd3: 38620985-38621984 Brachypodium distachyon
Bradi3g36520 1.0kb downstream 1.0kb downstream 3773 true Bd3: 38617212-38620984 Brachypodium distachyon
Bradi3g36520 1.0kb downstream 1.0kb downstream 1000 false Bd3: 38617212-38618211 Brachypodium distachyon
Bradi3g36520 2.0kb upstream 2.0kb upstream 4773 true Bd3: 38618212-38622984 Brachypodium distachyon
Bradi3g36520 2.0kb upstream 2.0kb upstream 2000 false Bd3: 38620985-38622984 Brachypodium distachyon
Bradi3g36520 2.0kb downstream 2.0kb downstream 4773 true Bd3: 38616212-38620984 Brachypodium distachyon
Bradi3g36520 2.0kb downstream 2.0kb downstream 2000 false Bd3: 38616212-38618211 Brachypodium distachyon
Bradi3g36520 5.0kb upstream 5.0kb upstream 7773 true Bd3: 38618212-38625984 Brachypodium distachyon
Bradi3g36520 5.0kb upstream 5.0kb upstream 5000 false Bd3: 38620985-38625984 Brachypodium distachyon
Bradi3g36520 5.0kb downstream 5.0kb downstream 7773 true Bd3: 38613212-38620984 Brachypodium distachyon
Bradi3g36520 5.0kb downstream 5.0kb downstream 5000 false Bd3: 38613212-38618211 Brachypodium distachyon
Bradi3g36520 10.0kb upstream 10.0kb upstream 12773 true Bd3: 38618212-38630984 Brachypodium distachyon
Bradi3g36520 10.0kb upstream 10.0kb upstream 10000 false Bd3: 38620985-38630984 Brachypodium distachyon
Bradi3g36520 10.0kb downstream 10.0kb downstream 12773 true Bd3: 38608212-38620984 Brachypodium distachyon
Bradi3g36520 10.0kb downstream 10.0kb downstream 10000 false Bd3: 38608212-38618211 Brachypodium distachyon

4 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
124571918 5269 Grass View MSA
122047464 5273 Angiosperm View MSA
121347035 5274 Embryophyte View MSA
123424416 5275 Viridiplantae View MSA

62 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.283     High  
cufflinks 19.728     High  
cufflinks 19.949     High  
cufflinks 19.997     High  
cufflinks 14.154     High  
cufflinks 20.978     High  
cufflinks 19.2     High  
cufflinks 23.607     High  
cufflinks 21.35     High  
cufflinks 25.075     High  
cufflinks 2.875       Low
cufflinks 17.911     High  
cufflinks 7.268     High Low
cufflinks 4.777       Low
cufflinks 6.773       Low
cufflinks 22.982     High  
cufflinks 19.311     High  
cufflinks 35.365     High High
cufflinks 17.895     High  
cufflinks 5.82       Low
cufflinks 21.003     High  
cufflinks 22.577     High  
cufflinks 19.827     High  
cufflinks 18.066     High  
cufflinks 19.55     High  
cufflinks 22.799     High  
cufflinks 6.988       Low
cufflinks 20.293     High  
cufflinks 20.807     High  
cufflinks 24.085     High  

0 Strain